| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3896 |
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| Symbol | |
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| ID | 5871690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4340569 |
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| End bp | 4341201 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641549018 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_001670122 |
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| Protein GI | 167034891 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.102896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTTC ACCTCCAAGC CGCGGGCCTG GCCTGCGAGC GCGACTGGCG CCTGCTGTTC
GAACAGCTCG ATTTCGAGCT GGGCGCCGGC GACATGCTGC AGATCAGCGG CCCCAACGGC
AGCGGCAAGA CCAGCCTGCT GCGGCTGCTG GCCGGGCTGA TGCAGCCGAC CGCCGGGCAG
ATCCTGCTGG GCGGCAAGCC ACTGGCCGAA CAGCGCCATG CCCTGGCCAG CATTCTGCTG
TGGATTGGCC ATGCCGCCGG CATCAAGGAC CTGCTCACCG CCGAGGAAAA CCTTACCTGG
CTGTGCGCCC TGCATCAGCC GGCCAGCCGC GAAGCGATCT GGGCGGCGCT GGAGGCTGTC
GGCTTGCGCG GTTTCGAAGA TGTACCCTGC CATACCCTGT CGGCCGGCCA GCAGCGCCGC
GTGGCCCTGG CCCGGTTGCA CCTGGCTTGC CCGCCGCTGT GGATTCTCGA CGAACCCTTC
ACTGCGCTCG ACAAGCAAGG TGTGGCGCAG CTGGAAGCTC ACCTGGCGGC CCACTGCGAG
CAGGGCGGCA CGGTGGTACT GACCACCCAC CACACGCTGG AACGCAAGCC CTCCGGTTAC
CGTGAACTGA ACCTGGGGCA ATGGGCGGCA TGA
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| Protein sequence | MTLHLQAAGL ACERDWRLLF EQLDFELGAG DMLQISGPNG SGKTSLLRLL AGLMQPTAGQ
ILLGGKPLAE QRHALASILL WIGHAAGIKD LLTAEENLTW LCALHQPASR EAIWAALEAV
GLRGFEDVPC HTLSAGQQRR VALARLHLAC PPLWILDEPF TALDKQGVAQ LEAHLAAHCE
QGGTVVLTTH HTLERKPSGY RELNLGQWAA
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