Gene PputGB1_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3870 
Symbol 
ID5871664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4316207 
End bp4317205 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content61% 
IMG OID641548992 
Productsulfate ABC transporter, periplasmic sulfate-binding protein 
Protein accessionYP_001670096 
Protein GI167034865 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1613] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAC TCTTCACCGC CTCACTGCTC GCCGCAGGCC TGGCCCTGGG TAACCTCGCC 
CAGGCCGCCC CTACCCTGCT CAACGTTTCC TACGACGTGA TGCGCGACTT CTACAAGGAC
TACAACCCAG CCTTCCAGAA ACACTGGGAA GCCGAGCACA AAGAGAAGGT CAACGTGCAG
ATGTCCTTCG GCGGCTCCAG CAAGCAGGCG CGTGCGGTGA TCGATGGCCT GCCGGCCGAT
GTCATCACCA TGAACATGGC CACCGACATC AACGCCCTGG TCGACAACGG CAAGCTGGTG
CCGGACAACT GGGTAACCCG CCTGCCGAAC AACAGCGCAC CGTTCACCTC GGCCACAGTG
TTCATCGTGC GCAAGGGCAA CCCAAAAGCC CTGAAAGACT GGCCCGACCT GCTTAAGGAC
GGCGTGCAGG TGATCGTGCC CAACCCGAAA ACCTCGGGTA ATGGCCGCTA CACCTACCTG
TCGGCCTGGG GCTACGTGCT CAAGCAAGGC GGTGATGAAA GCAAAGCCCG CGATTTCGTC
GGCAAACTGT TCAAGCAGGC CCCCGTCCTG GACACCGGCG GCCGCGCCGC CACCACCACC
TTCATGACCA ACCAGATCGG CGACGTGCTG GTCACCTTCG AGAACGAAGC CGAAATGATC
GCTCGCGAGT TCGGCCGCGA CCAGTTCGAA GTGGTCTACC CAAGCGTGTC GGCAGAAGCC
GAGCCGCCGG TGAGCGTGGT CGACAAGGTG GTGGCCAAGA AAGGTACCCA GGCCGTGGCC
GAGGAATACC TGAAGTACCT GTGGTCGCCA GAAGCCCAGG AGATCGCCGC CAACAACTAC
CTGCGCCCGC GCGATGCGAC GGTACTGGCC AAGTACACCG ACCGCTTCCC GAAAGTGGAC
TTCCTGTCGG TGGAAAAAAC CTTTGGTGAC TGGCGCACCG TGCAGAAAAC CCACTTCAAT
GATGGCGGGG TGTTTGACCA GATCTATAGC GGTCAGTAA
 
Protein sequence
MKKLFTASLL AAGLALGNLA QAAPTLLNVS YDVMRDFYKD YNPAFQKHWE AEHKEKVNVQ 
MSFGGSSKQA RAVIDGLPAD VITMNMATDI NALVDNGKLV PDNWVTRLPN NSAPFTSATV
FIVRKGNPKA LKDWPDLLKD GVQVIVPNPK TSGNGRYTYL SAWGYVLKQG GDESKARDFV
GKLFKQAPVL DTGGRAATTT FMTNQIGDVL VTFENEAEMI AREFGRDQFE VVYPSVSAEA
EPPVSVVDKV VAKKGTQAVA EEYLKYLWSP EAQEIAANNY LRPRDATVLA KYTDRFPKVD
FLSVEKTFGD WRTVQKTHFN DGGVFDQIYS GQ