| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3840 |
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| Symbol | |
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| ID | 5871634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4279809 |
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| End bp | 4283297 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548962 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001670066 |
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| Protein GI | 167034835 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.509302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA AGTGCATTCG TCTGGCCGGG TTCAAGTCGT TCGTCGACCC GACCACGGTC
AACTTCCCCA GCAACATGGC GGCTGTGGTA GGCCCCAACG GCTGCGGCAA GTCCAACATC
ATCGACGCGG TGCGCTGGGT GATGGGCGAG AGTTCGGCGA AGAACCTGCG CGGCGAGTCG
ATGACCGACG TCATCTTCAA CGGCTCGAGT GGCCGCAAAC CGGTCAGCCA GGCGAGCATC
GAGCTGGTGT TCGACAACAG CGAAACTACC CTGGTTGGCG AATATGCTGC CTACGCCGAG
ATCTCGATCC GGCGCAAGGT GACCCGCGAC GGGCAGAACA GCTATTACCT CAACGGCACC
AAATGCCGAA GGCGTGACAT TACCGACATC TTCCTCGGTA CCGGCCTGGG GCCGCGCAGC
TATTCGATCA TCGAGCAGGG CATGATCTCC AAGCTGATCG AAGCCAAGCC CGAGGAGCTG
CGCAACTTCA TCGAGGAAGC CGCCGGCATC TCCAAGTACA AGGAGCGCCG CCGCGAAACC
GAGAACCGCA TCCGCCGCAC CCAGGAAAAC CTGGCCCGCC TGACCGACTT GCGCGAAGAG
CTCGAGCGCC AGCTGGAGCG GCTGCATCGT CAGGCCCAGG CCGCCGAGAA GTACCGCGAG
TACAAGGCCC AGGAGCGCCA GATGAAGGCG TGCCTGGCGG CCTTGCGCTG GCGCGGCCTT
GACGAGCAGG TACGCCAGCG CGAGTCGGTG ATCGGCGATC AGGGCGTGTC CCACGAGGCG
CTGGTGGCCG AGCAGCGCAA TGCCGACGCG AGCATCGAAC GCCTGCGTGA CGGCCATCAC
GAATTGTCCG AACGCTTCAA TCAGGTGCAA GGCCGCTTCT ACTCGGTGGC CGGTGACATC
GCCCGGGTCG AGCAGAGCAT CCAGCACGGC CAGCAGCGCT TGCGCCAGTT GCAGGACGAC
TTCAAAGAGG CCGAACGCAC CCGCCTGGAA ACCGAATCGC ACCTTGGCCA CGACCGCACC
CTGCTGGCCA CCTTGGGCGA AGAGCTGGCC ATGCTCGAAC CCGAGCAGGA AATGACCCTG
GCCGCTGCCG AAGAGGCCGC TGCCGCGCTT GAGGAGGCCG AGCTGGGCAT GCACGGCTGG
CAGGAACAGT GGGACAGCTT CAACAGCCGT TCCGCCGAGC CGCGCCGCCA GGCTGAAGTG
CAGCAGACGC GCCTGCAGCA GCTGGAAACC AGCCTGGAGC GCCAGGCCGA GCGCCAGCGC
AAGCTGGGCG AAGAGCGCGA GCAGCTGGGT AGCGAGCCGC AGGATGTGGC CATGCTCGAA
TTTGCCGAGC AACTGGCCAG CAGCGAAATG TTACTGGAAG AATTGCAACT GTCCGAAGAG
CAGGTGGTCG AGCGCCTGGA AGGCACGCGC GAGCAACTGC AGCAGGCCAC CCAGGCCCAG
CAGCAGGCAC AGGGCGACCT GCAGCGCCTG GGCGGGCGCC TGGCCTCCCT TGAAGCCTTG
CAGCAGGCTG CTCTGGAGCC GGGTACAGGC GCTGCGCACT GGCTGCACGA CCAAGGGCTG
GAGCAACAGC CGCGGCTGGC CGAAGGATTG CGAGTAGAGC CAGGTTGGGA AACGGCCGTG
GAGACTGTGC TCGGCGCCGA TCTGCAGGCT GTGCTGGTAG ACGATTTCAA CCGCCTCGAT
TTTGCTGGCC TGGAGCAAGG CGAGTTGCGC CTGCTGCTGG CCAGCGACAA CAGCTTGCCT
TTGCCGGGCA GCCTGCTGGA AAAGGTCCAG GGCCGTATCG ACCTGGCGCC CTGGTTGGGC
CAGGTCAAGC CCGTGGAAGA CCTTGCCCAG GCACTGGCGC AGCGCGCATC GCTTGGCGAA
GGGCATAGTT TGGTCAGCCG AGATGGCTAC TGGGTTGGCC GGCACTTCTT GCGGGTGCGC
CGTGGTGGTG AAGCCGAAGG CGGCGTGCTG GCGCGCGGCC AGGAAATCGA GCGCCTGGGC
CAGGAACAAC TGGAACAGGA AGCAGCACTG GAGCAGCTCG ATCAACAGTT GCAGGCCCTG
CGCGAGCAGC AGTTGGGCCT GGAGGAGCAG CGCGAACAGT TGCGCCGCCG CACCCAGGAA
GAGAGCCGCC TGCACGGCGA GCTGAAGGCC AACCTTTCGG CCAGCCGTGC GCGTGCCGAG
CAGGTCGAGC TGCGCCGCCG GCGCCTGCAA GAAGAACTGA GCGAACTGGA AGAGCAGCGC
GCCCTGGAGC ACGAGCAACT GGGCGAAGCA CGCCTGTTGT TGCAAGAAGC CCTTGAGCTG
ATGGCCCAGG ACACCGAGCA GCGCGAACAG TTGATGGCCC GCCGCGACAC CCTGCGCGAA
GGCCTCGACC GGGTGCGCCA GGAGGCTCGC CAGCACAAGG ATCACGCCCA CCAGCTCGCG
GTGCGTCTAG GGTCGCTGCG TGCCCAGCAC GATTCCACCC GCCAGGCCCT GGAGCGCCTG
GAACAGCAGG CTGCGCGCTT GACCGAGCGG CAGGAGCAAC TGAGCCTGAA CCTGGAGGAG
GGTGAGGCCC CGCAGGAAGA GCTGCGCCTG AAGCTCGAAG AGTTACTGGA ACGACGCATG
AGCGTCGACG AGGAAATGCG CCAGGCCCGC CTGCACATGG ACGAAGCCGA CCGCGAGCTG
CGTGATGCCG AAAAACGGCG CACCCAGGCT GAGCAGCAGG CCCAGCTGCT GCGCGGCCAG
CTGGAGCAGC TGCGCCTGGA GTGCCAAGGC CTTGATGTGC GACGCAAGAC GCTGCAGGAG
CAACTGCTGG CCGACGGCTA CGACCTGCAA GGCGTGCTCG CTACCCTGGA GGCCGAGGCC
AGCGAGCAGG GTACCGAACA GGCGTTGGAA CAGCTTGAAG CGCGCATCCA GCGCCTGGGG
GCGATCAACC TGGCGGCCAT CGAAGAATAT GAACAGCAGT CCGAGCGAAA ACGCTACCTG
GACGCCCAGG ACGCCGACCT GGTCGAAGCG CTGGAGACCC TGGAAAACGT CATTCGCAAA
ATCGACAAGG AAACCCGCAA CCGCTTCAAG GATACCTTTG ATCAGATAAA TGCCGGATTA
CAGGCACTTT TCCCAAAAGT TTTCGGTGGT GGCAGCGCTT ATCTGGAACT GACGGGCGAA
GATCTACTCG ATACAGGGGT GACGATCATG GCGCGGCCAC CGGGCAAGAA GAACAGCACC
ATCCATCTGC TGTCCGGCGG CGAGAAAGCA CTGACCGCCT TGGCGCTGGT GTTTGCCATC
TTCAAGTTGA ACCCCGCACC GTTCTGCATG CTCGACGAGG TCGATGCGCC GCTGGACGAT
GCCAACGTCG GGCGCTATGC GCGCCTGGTC AAGGAAATGA GTGAAAGCGT GCAGTTCATC
TACATCACCC ATAACAAGAT TGCCATGGAA ATGGCGGACC AATTGATGGG GGTGACCATG
CATGAACCCG GTTGTTCACG TCTTGTTGCA GTTGATGTGG AGGCGGCCAT GGCCATGGTC
GACGCTTGA
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| Protein sequence | MRLKCIRLAG FKSFVDPTTV NFPSNMAAVV GPNGCGKSNI IDAVRWVMGE SSAKNLRGES
MTDVIFNGSS GRKPVSQASI ELVFDNSETT LVGEYAAYAE ISIRRKVTRD GQNSYYLNGT
KCRRRDITDI FLGTGLGPRS YSIIEQGMIS KLIEAKPEEL RNFIEEAAGI SKYKERRRET
ENRIRRTQEN LARLTDLREE LERQLERLHR QAQAAEKYRE YKAQERQMKA CLAALRWRGL
DEQVRQRESV IGDQGVSHEA LVAEQRNADA SIERLRDGHH ELSERFNQVQ GRFYSVAGDI
ARVEQSIQHG QQRLRQLQDD FKEAERTRLE TESHLGHDRT LLATLGEELA MLEPEQEMTL
AAAEEAAAAL EEAELGMHGW QEQWDSFNSR SAEPRRQAEV QQTRLQQLET SLERQAERQR
KLGEEREQLG SEPQDVAMLE FAEQLASSEM LLEELQLSEE QVVERLEGTR EQLQQATQAQ
QQAQGDLQRL GGRLASLEAL QQAALEPGTG AAHWLHDQGL EQQPRLAEGL RVEPGWETAV
ETVLGADLQA VLVDDFNRLD FAGLEQGELR LLLASDNSLP LPGSLLEKVQ GRIDLAPWLG
QVKPVEDLAQ ALAQRASLGE GHSLVSRDGY WVGRHFLRVR RGGEAEGGVL ARGQEIERLG
QEQLEQEAAL EQLDQQLQAL REQQLGLEEQ REQLRRRTQE ESRLHGELKA NLSASRARAE
QVELRRRRLQ EELSELEEQR ALEHEQLGEA RLLLQEALEL MAQDTEQREQ LMARRDTLRE
GLDRVRQEAR QHKDHAHQLA VRLGSLRAQH DSTRQALERL EQQAARLTER QEQLSLNLEE
GEAPQEELRL KLEELLERRM SVDEEMRQAR LHMDEADREL RDAEKRRTQA EQQAQLLRGQ
LEQLRLECQG LDVRRKTLQE QLLADGYDLQ GVLATLEAEA SEQGTEQALE QLEARIQRLG
AINLAAIEEY EQQSERKRYL DAQDADLVEA LETLENVIRK IDKETRNRFK DTFDQINAGL
QALFPKVFGG GSAYLELTGE DLLDTGVTIM ARPPGKKNST IHLLSGGEKA LTALALVFAI
FKLNPAPFCM LDEVDAPLDD ANVGRYARLV KEMSESVQFI YITHNKIAME MADQLMGVTM
HEPGCSRLVA VDVEAAMAMV DA
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