Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3826 |
Symbol | |
ID | 5871619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4264309 |
End bp | 4266783 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641548948 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001670052 |
Protein GI | 167034821 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC CCACCCCCTG CTACCACTGC GCCCTGCCCG TCCCGGCCGG CAGCCGCTTT ACCGCCGTGG TGCTCGGCGA GCCCCGGGCG TTCTGCTGCC CCGGCTGCCA GGCGGTGGCT GAGTCGATCG TCGCCGGCGG CCTGGAGCAC TACTACCAGC ACCGCAGTGA CAACAGCGCC AACCCCGAGG CCCTGCCCAG GCAGTTGCAG GACGAACTGG CCCTGTACGA CCGTAGCGAC GTGCAGCAAA CCTTCGTCCG TCACCAGGGC GAGCTGGCCG AAACCACCCT ACTGATCGAG GGGATCAGCT GTGCTGCCTG TGGCTGGCTG ATCGAAAAGC ACCTGCGCAA CCTGCCCGGC GTCGCCGAGG CGCGCCTGAA CCTGTCCAAC CACCGTCTGC TGCTGAGCTG GGACGACAAG CAACTGCCGC TCTCGCGCCT GCTCGCCGAG TTGCGCCAGA TCGGTTACGC CGCCCACCCC TACCAGCCCG ACAAGGCCGC CGAACAGTTG GCCCAAGAGA ACCGCAGCGC CCTGCGCCGC CTGGGCGTGG CCGGGCTTTT GTGGTTCCAG GCGATGATGG CAACCATGGC CACCTGGCCG GAATTCAACA TCGACCTGTC GCCCGAGCTG CACACCATCC TGCGCTGGGT GGCACTGTTC CTGACCATCC CCATCGTGTT CTACAGCTGC GCACCGTTCT TCAAGGGCGC AGCGCGCGAC CTGCGCACCC GTCACCTGAC CATGGACGTT TCGGTGTCAC TGGCCATTGG CCTGGCGTTC GGTGCCGGCA TCTGGACGGC CATCACCGGC AGCGGCGAGC TGTATTTCGA CACGGTGGGC ATGTTCGCCC TGTTCCTGCT CACTGGCCGC TACTTGGAGC GTCGTGCCCG CGAACGCACG GCTGCGGCCA CCGCGCAGCT GGTCAACCTG CTGCCAGCCT CGTGCCTGCG CCTGGACGCC ATCGGCCGCA GCGAGCGCAT CCTGCTCAGC GAGCTGCACT GCGGTGACAC CGTGCAAGTG CTGCCTGGGG CGGTAATCCC CGCCGACGGG CGCATCGTCG AAGGCCGCTC CAGCGTCGAC GAATCATTGC TGACTGGCGA ATACCTGCCG CAACCGCGCC GGGTTGGCGA ACGGGTCACC GGTGGCACGC TGAATGTCGA AAGCACCCTG AACGTGGAAG TCGAAGCCCT CGGCCACGAT TCACGGTTGT CTGCCATCGT GCGCCTGCTG GAACGCGCCC AGACCGAAAA ACCGCGCCTG GCGGAAATCG CCGACCGCGC CTCGCAGTGG TTCCTGTTGT TCTCGCTGCT GGCCGCCGTG GCCATCGGGC TGTGGTGGTG GCATCTGGAC CCGACACGGG CATTCTGGAT CGTGCTGGCG ATGCTGGTGG CGACCTGCCC TTGTGCGCTG TCCCTGGCCA CGCCAACCGC GCTTACCGCA GCCACCGGCA CCTTGCACAA GCTCGGCCTG CTGGTAACCC GTGGCCATGT GCTGGAGGGC CTGAACCAGA TCGACACAGT CATTTTCGAC AAGACCGGCA CGCTGACCGA AGGCCGCCTG ACCCTGCGCA GCATCCGCCC GCTCGGCAGC CAGGCAGCCG ACCGCTGCCT GGCCCTCGCC GCAGCGCTGG AAAACCGCTC CGAACACCCC ATCGCCCGTG CCTTCGGCCG CACCACCACA CCCGCCGAGG ACGTGCAGAC AATGCCCGGC CTGGGCCTGG AGGGGCTGGT GGACGGCCAG CGCTTGCGCA TTGGCCAAGC CACCTTCGTC TGCGCCCTGA GCGGCGCGGA AATCCCCGCC GTGCCGGAGC CACGCGGCCA GTGGCTGCTG CTGGGCGACC GCCAGGGGCC GCTGGCCTGG TTCGGCCTGG ACGACCGCCT GCGCGACGAT GCCCCGGCCC TGCTCGCGGC CTGCAAGGCA CGTGGCTGGC GAACCCTGCT GTTGTCGGGC GACAGCTCGC CGATGGTTGC CGAAGTGGCC GCGCAACTGG GCATCGACCA GGCCATTGGC GGGCTGCTTC CAGACGACAA GCTGGACCGG CTGAAGGCAC TGCAGGCACA AGGGTGCAAG GTGCTGATGC TCGGTGACGG CGTCAACGAT GTGCCGGTGC TGGCCGCCGC CGACATCAGC ATCGCCATGG GCAGCGCCAC CGACCTTGCC AAGACCAGCG CCGATGCCGT GCTGCTGTCC AACCGCCTGC AGGCGCTGGT GCAGGCATTC GACCTGGCCC GCCGCACCCG CCGCAACATC CTCGAGAACC TGCTGTGGGC GACCCTGTAT AATGGCCTGA TGTTGCCGTT TGCCGCGCTC GGCTGGATCA CCCCGGTATG GGCCGCCATC GGCATGTCGG TCAGTTCGCT GATCGTGGTG CTCAACGCCC TGCGCCTGAC CCGCATGCCA TTGGCGTCGG GCTCATTGCC CCACGAAGCC CCCTTGCCCG GGAGGAAGTC GCCATGCCCG CCCTCTATGT CATGA
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Protein sequence | MTQPTPCYHC ALPVPAGSRF TAVVLGEPRA FCCPGCQAVA ESIVAGGLEH YYQHRSDNSA NPEALPRQLQ DELALYDRSD VQQTFVRHQG ELAETTLLIE GISCAACGWL IEKHLRNLPG VAEARLNLSN HRLLLSWDDK QLPLSRLLAE LRQIGYAAHP YQPDKAAEQL AQENRSALRR LGVAGLLWFQ AMMATMATWP EFNIDLSPEL HTILRWVALF LTIPIVFYSC APFFKGAARD LRTRHLTMDV SVSLAIGLAF GAGIWTAITG SGELYFDTVG MFALFLLTGR YLERRARERT AAATAQLVNL LPASCLRLDA IGRSERILLS ELHCGDTVQV LPGAVIPADG RIVEGRSSVD ESLLTGEYLP QPRRVGERVT GGTLNVESTL NVEVEALGHD SRLSAIVRLL ERAQTEKPRL AEIADRASQW FLLFSLLAAV AIGLWWWHLD PTRAFWIVLA MLVATCPCAL SLATPTALTA ATGTLHKLGL LVTRGHVLEG LNQIDTVIFD KTGTLTEGRL TLRSIRPLGS QAADRCLALA AALENRSEHP IARAFGRTTT PAEDVQTMPG LGLEGLVDGQ RLRIGQATFV CALSGAEIPA VPEPRGQWLL LGDRQGPLAW FGLDDRLRDD APALLAACKA RGWRTLLLSG DSSPMVAEVA AQLGIDQAIG GLLPDDKLDR LKALQAQGCK VLMLGDGVND VPVLAAADIS IAMGSATDLA KTSADAVLLS NRLQALVQAF DLARRTRRNI LENLLWATLY NGLMLPFAAL GWITPVWAAI GMSVSSLIVV LNALRLTRMP LASGSLPHEA PLPGRKSPCP PSMS
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