| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3769 |
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| Symbol | |
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| ID | 5871562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4193865 |
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| End bp | 4195307 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548891 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001669995 |
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| Protein GI | 167034764 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.492539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC TGCTGCTGTA CCAGCGTATC GCCCAGCAAC TGGCCGATGA CATCCGTCGC
GGTGTCTACC AGCCAGGCGA GCGGGTGCCC TCCGTGCGCA AGATGAGCGC CCAGCTCAAT
GTCAGCCATG CCACGGTGCT GCAGGCCTAT GCCAACCTCG AGGATCAGGG GCTTATCCGC
GCGCGACCGC AGTCTGGCTA CTATGTGCAT CAGACCCCGG CCTTGACCGC GCAAACCCCG
GACATTGCCC GGGTGGAGCG CCCCGGCCTG GTCACGCGCG CCAGCATCAT TCAGCAGGTG
CTGACCGAGG CGCGCCGCGA TGGTGTGTTC CCGTTCGGCG CCGCCGTACC GCATGTCGAC
TACTTGCCCG TGCGCGCCCT GCATCAGCAA ATTGCCAAGG TGACGCGCTT CCATAGCCCT
CGCGCCTTCA GCTACATGTT CAGCCCTGGT TTCGAGCCGC TGCGCCGGCA GATCGCCATT
CGCATGCGCG ATGCCGGCGT GCTGGTCGAC CCGCGTGAAG TGATCGTGAC CCATGGGTGT
GTCGATGCCC TGCAGATGTC GCTGCGGGTG CTGACCCGCC CGGGAGACCT GATCGCCGCC
GAATCGCCTA CCTATTACGG CTTGCTGCAG TTGGCTGACC TGCTGGGCCT GAAAGTGATC
GAAATCCCCA GCGATCCGTC CACTGGCATC AGCCTCGAGG CCTTGCAACT GGCGGCCAAT
CAGTGGTCGA TCAAGGCCCT GGTACTGACG GCGCGCCTGA GTAATCCGCT GGGCGGCACG
GTCCCGGAAG AACGGCAAAA GCAATTGCTG CGCCTGGCCT CGGACTTCGA TATCCAGATC
ATCGAAGACG ATATCTATGG CGAGCTGATG TTCGAGCAGG GCAAGACCAA GGCGCTGAAG
GCGTTCGACC GACTGGACCG CGTGATCTAC TGTTCGAGCT TCTCCAAAAC CTTGTCCCCC
GGTGTGCGCG TGGGCTGGAT GATCGCTGGG CGTTATCAGG ACGAGATTCA GCGCCTGCAG
ACCTTCACCA CGCACTCGGC GTGCAGCGTG ACGCAGATGG GGGTGGCAGC CTACCTGGAA
AATGGCGGCT ACGACCGGCA CCTGCGCTAC ATACGCCAGG AGTATCGCAA GAACCTCAGT
GCCTATCAGT TGGCGGTGCA ACAGCACTTC CCTGAGGGCA CCCAGATGAC CCGGCCGACG
GGTGGCTTCA TTCTCTGGGT GAGCCTGCCG GGGCGGGTCA ATACCCAGGA GCTGCATGTG
CGCGCGCTGG AGCAAGGTAT CAGCATTGCG CCGGGGTTAA TATTCAGTAA CACAGAGCAG
TTCAACCACT GTATCCGCCT CAATTGCGGC ATTCCGTGGA ACAAAGAGGC CGAGCGCGCT
GTGATTACGC TTGGTTTGCT GGCACAGCAG TTGTGCAGGG AGCCTGCGCT CACACTTTTG
TAA
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| Protein sequence | MTNLLLYQRI AQQLADDIRR GVYQPGERVP SVRKMSAQLN VSHATVLQAY ANLEDQGLIR
ARPQSGYYVH QTPALTAQTP DIARVERPGL VTRASIIQQV LTEARRDGVF PFGAAVPHVD
YLPVRALHQQ IAKVTRFHSP RAFSYMFSPG FEPLRRQIAI RMRDAGVLVD PREVIVTHGC
VDALQMSLRV LTRPGDLIAA ESPTYYGLLQ LADLLGLKVI EIPSDPSTGI SLEALQLAAN
QWSIKALVLT ARLSNPLGGT VPEERQKQLL RLASDFDIQI IEDDIYGELM FEQGKTKALK
AFDRLDRVIY CSSFSKTLSP GVRVGWMIAG RYQDEIQRLQ TFTTHSACSV TQMGVAAYLE
NGGYDRHLRY IRQEYRKNLS AYQLAVQQHF PEGTQMTRPT GGFILWVSLP GRVNTQELHV
RALEQGISIA PGLIFSNTEQ FNHCIRLNCG IPWNKEAERA VITLGLLAQQ LCREPALTLL
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