Gene PputGB1_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3730 
Symbol 
ID5871523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4149848 
End bp4152502 
Gene Length2655 bp 
Protein Length884 aa 
Translation table11 
GC content68% 
IMG OID641548852 
Productosmosensitive K+ channel signal transduction histidine kinase 
Protein accessionYP_001669956 
Protein GI167034725 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATT CCGCCCGCGC AGACGCGCTG TTGGCTAACC TTGCGCGAAC CGGCCGGGGC 
CGGCTGAAGG TGTTCCTTGG CGCCGCCCCC GGTGTCGGCA AGACGTTCGC CATGCTCCAG
GCCGCACACG CCCAGCAGCG TCAGGGCGTG CAAGTGCTGG CTGGCGTTGT CGAAACCCAC
GGCCGCGCCG AAACCGAAGC GCTGCTTGCC GGCCTTCAGC AACAGCCCTT GCTGCGCAGC
CAGTACCGTG GCGTCACCCT TGAGGAAATG GACCTCGACG GCCTGCTCCA AGCCTCACCG
GCCTTGGCCC TGGTCGACGA ACTGGCCCAC ACCAACGCCC CCGGCAGCCG CCACGCCAAG
CGCTGGCAGG ACGTGCAGGA GTTGCTGGCC GCCGGTATCG ACGTGTACAC CACGGTCAAC
GTCCAGCACC TGGAAAGCCT CAACGACAAG GTGCGCGACA TTACGGGCGT GCAAGTGCGC
GAAACGCTGC CGGACTGGGT GCTGCAGGAA GCCTTCGAGT TGGTGCTGAT CGACCTGCCC
CCGCGCGAGC TGCTCGAACG CCTGCGCGAA GGCAAGGTGT ATGTGCCCGA GCAAGCGCGT
GCGGCCATCG ACGCGTACTT CTCGCAAACC AACCTCACCG CCCTGCGCGA ACTGGCCATG
CAGACCGCCG CTGCTCAGGT CGACGCTGAC CTGGCCCACG GCTATCGCCA GCGCGGCCAG
GAAGCCCCGG CCTTGCGCGG GCGGTTGCTG GTAGGCGTGG ACGGCGATGA CCAGGCCGAA
CGCCTGGTGC GTCATGCCAG CCGTGTGGCT CAGCGCCGCC ACCTGCCCTG GAGCCTGGTG
CATGTGGACA ACGGCCGCCT GCGTGACGAA ACCGCGCGGC ATCGTTTGCA GGCCGCGCAG
CAACTGGCCG AACGTCTGGG TGGGGAGGTG GTACTGCTGC GTGCTGGCGA AGTGGCGCGC
ACGTTGATCC AGCATGCTGC CGAGCGGCGG GCCAGTCTGG TGCTGGTCGG GCAGTCCCGC
GACCGCCTGC GTCGGCGGCT GTTCGGGGCC GGTGTGGCGG CGCGGCTGCT GCGCGAAAGC
CATGGCCTGG AAGTCAACGT GCTGGACCGC GACGTGCAGC CGCCAGCGCC GCGTTCGGCG
GTGCGGCGGG TATGGGTGTG GCGCCATTAC CTGCTGGCGC TGCTGGCCAC CGTGATGGCG
GCGGGCCTGG CCTGGGCAGT GTCGAGCGTA CTGGCGCTGC CCAACATTTC ACTGGTGTTC
CTGGCGGCAG TGTTGCTGGT GGCGGTGCGC AGCAGCCTGG GGCCTGCGTT GGCCTGCGCC
GCGCTGTCGT TCCTGACTTA CGATTTTCTG TTCATCCCGC CCAACTTCTC GTTCAGCATC
CAGCGCGAAG AAGATGTGCT GACCCTGGTG TTCTTCCTGC TGATGGCCGC ACTCACCGGC
AACCTGGCCG CGCGCCAGCG CCGCCAGTTG CAGGCACTGC GCGAGACCCA GGCGCAGACC
AGCCAGTTGC TCGACCTGTC GCGTCGGCTG ACGGTGGCCA CCGATCGCCA AGCCGTGTTC
AATGCCGCCG GCCAACATCT GGACGGCTGG CAGGACATGC AGGTGTGCCT ACTTGAGCGC
AATGCCGAAG GCCAGCTGGA AGTGGCCAGT GGCGAAGCCC ACGCCTTCAG TGACACCGAA
CGGGCTGCCG CCGATTGGGC CTGGCAGCAC GGCCAGGCCG CTGGCCATGG CAGCGACACC
TTGCCCAATG GCCGCTGGTG GTGGTGGCCG CTGGCGGTGG ACGAACAACC TCTGGCGCTG
CTGGGCGTGC GCCCGCGCAA CGGGCAGCCG CTCAGCGACC CACGCCGGCG CCTGCTCACC
GCCCTTGGCC AGCCACTGGC CCAGGCCCTG GCCCGCGCTC GCCTGGCCGA ACAACTGGAA
GCCGCGCGTC TGCACGGCGA AACCGAGCAA CTGCGCAGCG CCTTGCTGGC CTCGGTATCC
CATGACTTGC GTACACCGTT GACCGCCATG CGTGGCAGCA TCGACAGCCT GCTGGCGTTG
GGCGAGGCAA TCCCGGCTGA AGACCGCCGC GAGCTGTTGG AAGGCACCCG TAACGAGGCC
GAACGCCTTG ACCGCTACAT CCAGAACCTA CTGGACATGA CCCGCCTGGG CCACGGTGGC
CTCAAGCTGG CCCGCGACTG GGTAGCCCCG GCGGACATCG TCGGTAGCGC GCTTAACCGC
CTGCGCGTGG TGCTGGCACC GCTGCGGGTG CACACCGACG TACCGGCCGA GCTGCCGTTG
CTGTTCGTAC ATGCGGCGCT GATCGAACAG GCGCTGGTCA ACGTGCTGGA AAACGCCGCA
CGCTTCTCCC CGACCCAGGG TCGCCTAGAG CTGCAGGTGG CCGTGCAGGA TGACCAGTTG
CGCTTTATCG TCCGCGATCA GGGCCCCGGC ATTCCCGTCG CCGACCGCGA GAAGATCTTC
GACATGTTCT ACACCGCTGC TCGGGGCGAC CGGGGCGGGC AGGGCACCGG GCTGGGCCTG
GCGATCTGTC AGGGCATGAT CGGTGCACAT GGCGGGCAGA TTCTGGTGGG CGAAGGCATC
GATGGCCAGG GCACCGGCAT CACTCTATGC TTGCCGCTAC CTCCTCAACC TGAAGCCGAA
AGCGAAACCC CATGA
 
Protein sequence
MSDSARADAL LANLARTGRG RLKVFLGAAP GVGKTFAMLQ AAHAQQRQGV QVLAGVVETH 
GRAETEALLA GLQQQPLLRS QYRGVTLEEM DLDGLLQASP ALALVDELAH TNAPGSRHAK
RWQDVQELLA AGIDVYTTVN VQHLESLNDK VRDITGVQVR ETLPDWVLQE AFELVLIDLP
PRELLERLRE GKVYVPEQAR AAIDAYFSQT NLTALRELAM QTAAAQVDAD LAHGYRQRGQ
EAPALRGRLL VGVDGDDQAE RLVRHASRVA QRRHLPWSLV HVDNGRLRDE TARHRLQAAQ
QLAERLGGEV VLLRAGEVAR TLIQHAAERR ASLVLVGQSR DRLRRRLFGA GVAARLLRES
HGLEVNVLDR DVQPPAPRSA VRRVWVWRHY LLALLATVMA AGLAWAVSSV LALPNISLVF
LAAVLLVAVR SSLGPALACA ALSFLTYDFL FIPPNFSFSI QREEDVLTLV FFLLMAALTG
NLAARQRRQL QALRETQAQT SQLLDLSRRL TVATDRQAVF NAAGQHLDGW QDMQVCLLER
NAEGQLEVAS GEAHAFSDTE RAAADWAWQH GQAAGHGSDT LPNGRWWWWP LAVDEQPLAL
LGVRPRNGQP LSDPRRRLLT ALGQPLAQAL ARARLAEQLE AARLHGETEQ LRSALLASVS
HDLRTPLTAM RGSIDSLLAL GEAIPAEDRR ELLEGTRNEA ERLDRYIQNL LDMTRLGHGG
LKLARDWVAP ADIVGSALNR LRVVLAPLRV HTDVPAELPL LFVHAALIEQ ALVNVLENAA
RFSPTQGRLE LQVAVQDDQL RFIVRDQGPG IPVADREKIF DMFYTAARGD RGGQGTGLGL
AICQGMIGAH GGQILVGEGI DGQGTGITLC LPLPPQPEAE SETP