| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3681 |
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| Symbol | |
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| ID | 5871474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4094981 |
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| End bp | 4096231 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548804 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001669908 |
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| Protein GI | 167034677 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.232958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000511444 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCAGG AAAGTATCAG CCAATCCATC GCCATCGTTC ACCCGATCAC ACTTTCCCAT
GGCCGCAATG CCGAAGTCTG GGACACCGAC GGCAAACGCT ATATCGACTT TGTCGGCGGT
ATCGGTGTAC TCAACCTGGG CCACTGCAAC CCGGCCGTGG TCGAGGCCAT CCAGGCCCAG
GCCACCCGCC TGACCCACTA CGCCTTCAAC GCGGCACCTC ACGGCCCGTA CCTGGCGTTG
ATGGAGCAGC TGAGCCAGTT CGTGCCCGTC AGCTACCCAC TGGCCGGCAT GCTCACCAAC
AGCGGCGCGG AAGCAGCGGA AAACGCCCTG AAAGTGGCCC GCGGCGCTAC CGGCAAGCGC
GCCATCATCG CCTTCGACGG TGGCTTCCAT GGGCGCACCC TGGCCACCTT GAACCTCAAC
GGCAAAGTCG CCCCTTACAA GCAACGGGTC GGAGAACTGC CCGGGCCGGT GTACCACCTG
CCCTACCCCA GCGCCGACAC CGGGGTGACC TGCGAACAGG CACTCAAGGC CATGGACCGC
CTGTTCAGCG TCGAGCTGGC CGTGGAAGAC GTGGCAGCGT TCATCTTCGA ACCGGTACAA
GGCGAAGGCG GCTTCCTCGC CCTGGACCCG CCCTTCGCCC AGGCCCTGCG CCGCTTCTGC
GACGAGCGCG GCATCCTGAT CATCATCGAC GAGATCCAGT CGGGCTTTGG CCGCACCGGC
CAGCGCTTCG CCTTCCCGCG CCTGGGCATC GAGCCCGACC TGCTGCTGCT GGCCAAGAGC
ATTGCCGGTG GCATGCCACT GGGTGCGGTG GTCGGGCGCA AGGAATTGAT GGCATCGCTG
CCCAAGGGCG GCCTGGGTGG CACCTATTCA GGCAACCCGA TTGCCTGTGC GGCAGCCCTG
GCCAGCCTGG CGCAGATGAC CGACGAAAAC GTCGCCACCT GGGGTGAGCG CCAGGAGCAG
GCGATCGTCA GCCGTGTCGA GCGCTGGAAG TCCTCGGGCC TGAGCCCGTA CATCGGCCGC
CTGACCGGCG TGGGCGCCAT GCGCGGTATC GAGTTCGTCA ATGCCGACGG CAGCCCGGCA
CCGGCGCCAC TGGCCAAGGT GATGGAGGCG GCGCGGGCCA AGGGCCTGCT GCTGATGCCC
AGCGGCAAAG CGCGGCACAT CATCCGCCTG CTGGCCCCCC TGACCATCGA GGCCGAGGTG
CTCGAAGAAG GCCTGGATAT CCTCGAGCAG TGCCTGACGG AGCTGAACTG A
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| Protein sequence | MNQESISQSI AIVHPITLSH GRNAEVWDTD GKRYIDFVGG IGVLNLGHCN PAVVEAIQAQ
ATRLTHYAFN AAPHGPYLAL MEQLSQFVPV SYPLAGMLTN SGAEAAENAL KVARGATGKR
AIIAFDGGFH GRTLATLNLN GKVAPYKQRV GELPGPVYHL PYPSADTGVT CEQALKAMDR
LFSVELAVED VAAFIFEPVQ GEGGFLALDP PFAQALRRFC DERGILIIID EIQSGFGRTG
QRFAFPRLGI EPDLLLLAKS IAGGMPLGAV VGRKELMASL PKGGLGGTYS GNPIACAAAL
ASLAQMTDEN VATWGERQEQ AIVSRVERWK SSGLSPYIGR LTGVGAMRGI EFVNADGSPA
PAPLAKVMEA ARAKGLLLMP SGKARHIIRL LAPLTIEAEV LEEGLDILEQ CLTELN
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