| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3558 |
|---|
| Symbol | |
|---|
| ID | 5871349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 3958583 |
|---|
| End bp | 3958900 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641548679 |
|---|
| Product | sterol-binding domain-containing protein |
|---|
| Protein accession | YP_001669785 |
|---|
| Protein GI | 167034554 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3255] Putative sterol carrier protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.336208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.355565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCG TAGCTGATGC CGTTAAGAAG ATGCAAGAGA AGTTCAACCC AGCCGCTGCC
GCCGGCCTGG ACCTGGTGTT CGGCTTCGAC ATCACCGACG AAGGCAAGAA ATACGCGCTG
ATCGTCAAAG ACGGCACCTG CGACCTGCAG GAAGGCGAAA ACCCGGATGC CAACTGCACC
CTGGTGATGG ACAGCGAAAC CCTGAAAGGT ATCGTCAGCG GCGAAACCGA CGGCATGCAG
GCCTTCATGG GCGGCAAGCT GCGCGTTGAA GGCGACATGA TGCTGTCGAT GAAGCTCAGC
GAGCTGTTCC CGTCCTGA
|
|---|
| Protein sequence | MTSVADAVKK MQEKFNPAAA AGLDLVFGFD ITDEGKKYAL IVKDGTCDLQ EGENPDANCT
LVMDSETLKG IVSGETDGMQ AFMGGKLRVE GDMMLSMKLS ELFPS
|
|---|
| |