| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3522 |
|---|
| Symbol | |
|---|
| ID | 5871309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3927838 |
|---|
| End bp | 3928263 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641548639 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001669749 |
|---|
| Protein GI | 167034518 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.267004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAC TGGAGCGGGC CATTGCCGTG GCCGCCAGGG CGCATGAAGG GCAATACGAC
AAGGGTGGGG CGGCTTATAT CCTCCACCCG TTACGCGTGA TGATGCGGGT TGCCACGCCC
GAGCAACGGA TTGTCGCGGT GCTTCACGAT GTGATCGAAG ATACCCCGCT GACCCTGTCC
GACCTGGCGC GCGAGGGCTT CGCGCTGAAA ATCCTTGCCG CGTTGCTGGC GCTAAGCCGC
CGCGAGGGCG AGGCCTACCA GGACTTCGTG GTGCGCCTGG GCGATGACCC GCTGGCGCGC
ACCGTCAAGC TGGCCGACCT GGCCGACAAC AGTGACCTCT CACGCATTCC CTGCCCAAGC
CCCGCTGACC TGGCGCGGCT GGCCCGCTAT CGGGAAGCCA GCGCCTACTT GCAGGCGCTG
GTGTGA
|
|---|
| Protein sequence | MSTLERAIAV AARAHEGQYD KGGAAYILHP LRVMMRVATP EQRIVAVLHD VIEDTPLTLS
DLAREGFALK ILAALLALSR REGEAYQDFV VRLGDDPLAR TVKLADLADN SDLSRIPCPS
PADLARLARY REASAYLQAL V
|
|---|
| |