| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3516 |
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| Symbol | |
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| ID | 5871303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3921537 |
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| End bp | 3922676 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548633 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_001669743 |
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| Protein GI | 167034512 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.179563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.283604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG ATACCAGAAT TGACTTCATC TACCTGTCCG AGCAGGACAT GATCCGCGCC
GGCGTCACCG ACATGCCCGC CTGTGTCGAC ACCATGGAAG AAATGTTCGG CTTGCTGTAC
CAGGGCGACT ACCGCATGGC CGGCCCGAAC AGCGACTCGC ACGGTGCGAT GATCACCTTC
CCCGAGCACT CGCCCTTCCC CAATATGCCC AAGCCCACCG CCGACCGGCG CATGATGGCG
ATGCCAGCCT ACCTCGGCGG CAACTTCCAG ACCGCCGGCG CCAAGTGGTA CGGCTCGAAC
ATCGCCAACC GCGAGAAAGG CCTGCCCCGC TCGATCCTGA TGTTCACCCT CAACGATGCC
GACACTGGCG CGCCACTGGC GCACATGTCG GCCAACCTGC TGTCGGCCTA CCGTACCGGC
GCCATCCCAG GCGTAGGTGC CCGCCACCTG GCGCGCAAGG ACGCCAAGGT CATCGGCCTG
GCCGGCCCGG GGGTGATGGG CAAAACCACG GTCGCCGCGT TCATGGCTGT CTGCCCACTG
ATCGACACCA TCAAGATCAA GGGCCGCGGC CAGAAAAACC TGGATGCCTT CGTCGCCTGG
GTCAAAGCCA GCTTCCCGCA AATCGTCAAC GTGCAGGTGG TTGAAACCCT GGAAGAGGTG
GTACGCGGCT CCGACCTGGT CACCTACTGC AGCTCGGGCG AAGTGGGCGA CCCCAGCCAG
TATCCCCTGG TGCGTCGCGA ATGGGTCAAG CCTGGCGCAT TCCTGGCGAT GCCAGCCCCG
TGCAGCATCG ATGCCGGCAT GGAGCAGGAC GACGTGCGCA AGGTGGTCGA CAACACCGGC
CTTTACGAGG CCTGGTTCGA AGAACTGCCC AAGCCTGCGC ATAACCACGT GCCGCTGGTG
GGCGTGCGTT TCATGGACAT GATTCACGAA GGCAAGCTGG CCGCCGAGCA GGTGGAAGAC
ATCGGCAAGA TCATCAGCGG CGACGCACCA GGGCGTCTGC ATGACGACGA AATCATCCTG
ATGTCGGTGG GCGGCATGCC TGTCGAGGAT GTGGCCTGGG GCACCGTGGT GTACCGCAAG
GCGCTGGAGC AAGGCATCGG CGTGAAGCTC AACCTTTGGG AAACCCCCGT TCTCAGCTGA
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| Protein sequence | MTLDTRIDFI YLSEQDMIRA GVTDMPACVD TMEEMFGLLY QGDYRMAGPN SDSHGAMITF
PEHSPFPNMP KPTADRRMMA MPAYLGGNFQ TAGAKWYGSN IANREKGLPR SILMFTLNDA
DTGAPLAHMS ANLLSAYRTG AIPGVGARHL ARKDAKVIGL AGPGVMGKTT VAAFMAVCPL
IDTIKIKGRG QKNLDAFVAW VKASFPQIVN VQVVETLEEV VRGSDLVTYC SSGEVGDPSQ
YPLVRREWVK PGAFLAMPAP CSIDAGMEQD DVRKVVDNTG LYEAWFEELP KPAHNHVPLV
GVRFMDMIHE GKLAAEQVED IGKIISGDAP GRLHDDEIIL MSVGGMPVED VAWGTVVYRK
ALEQGIGVKL NLWETPVLS
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