| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3508 |
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| Symbol | |
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| ID | 5871295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3911841 |
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| End bp | 3913139 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548625 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001669735 |
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| Protein GI | 167034504 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.300203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCC TCGAGAGCCC CACGTATTAC TCGGCGACCA AGAAGTACAA CCTGAATTTC
CCCACCCTGG AAAATGACAT CGAAGCCGAT GTCGTGGTGA TCGGCGGTGG CTTCTCCGGT
ATCAACACCG CGCTGGAGCT GGCAGAACAG GGTGTGGCCA ATGTGGTCGT GCTCGAAGCC
CGCTACCTGG GCTACGGCGG TACCGGGCGC AACGGTGGGC AGATCATGGC AGGTATCGGC
CACGACCTGG AAAACATCCG CAGCAGCGTG GGTGACCAAG GCGTGAAGGA AATGTTCGAG
ATCAGCGAGC TGGGCGCAGG CATCATCAAG GAACGCATCG CCCGCTACGC CATCGACGCC
GACTTTTGCC ACGGCTATGG CTACATGGGC TTCAACCACC GCCAGGAACA AACCCTGCGC
AAGTGGGAAA AGGCATTCAA GGCAATCAAC ACCCGCGACG AAATCCGCTT TCTCGGCGGC
AGTGAGGTGC ACCAGATCAT CGGCAGCACC GCCTACAGCA GCGCCCTGCT GCATATGGGC
GGTGGCCATG TGCATTCACT GAACCTGCTG CTGGGCGAAG CACAGGCGCT GGTCAGCCAT
GGCGCGCGCA TCTTCGAACA CAGCCCGGCC CTGGAAGTGA CCTACGGCGA ACGCATCAAG
GTACGCACCG GCCGCGGTTC GGTACGCGCC AGCAAGCTGC TGTGGGCGTG CGACAGCTTC
CTCAACAAGC TGGAGCCGGA GCTGCACGCA CGCACCATCA ACACCTATGC CTTCCAGATG
ATGACCGAGC CGTTGCCGGA TGAACTGATC GAGCGCATCA GCCCGATACG CGGTGCCTAC
AGCGATATCC GCCCGGTGAT CGACTACTAC CGGGTCACGC GTGAGAACCG CCTGCTGTTC
GGGGCCGCCA CCCCCTTCGT CGAGCACGTT CCGCTGGACC TGAAGGCCTG GAACCGCGCG
CTGATGCTGA AGATTTTTCC CTACCTGAAA AACGTGCGCA TCGACCTGGC CTGGGGCGGA
CCAATGGCCA CCAGTGCCAA CCTGTTTCCG CAAATCGGCA CCCTCGGCAA CCGGCCCAAT
GCCTTCTACG TGCAGGGTTA CTCCGGCTTT GGCGTCACCC CCAGCCACAT CATCTGCAAG
ATCCTCGCCG AGGGCATGCT CGAAGGCTCC AGGCGCTATG ACCTGGTCAG TTCGGTCAAG
CATGCGCGCA TCCTCGGCAA GGACTACCTG CGCCCGCTGC TGCTCACCGC CGGCAAGACC
GTGCACCAGC TGTCTGGCTA CTTCAACGGC CGCCGCTGA
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| Protein sequence | MITLESPTYY SATKKYNLNF PTLENDIEAD VVVIGGGFSG INTALELAEQ GVANVVVLEA
RYLGYGGTGR NGGQIMAGIG HDLENIRSSV GDQGVKEMFE ISELGAGIIK ERIARYAIDA
DFCHGYGYMG FNHRQEQTLR KWEKAFKAIN TRDEIRFLGG SEVHQIIGST AYSSALLHMG
GGHVHSLNLL LGEAQALVSH GARIFEHSPA LEVTYGERIK VRTGRGSVRA SKLLWACDSF
LNKLEPELHA RTINTYAFQM MTEPLPDELI ERISPIRGAY SDIRPVIDYY RVTRENRLLF
GAATPFVEHV PLDLKAWNRA LMLKIFPYLK NVRIDLAWGG PMATSANLFP QIGTLGNRPN
AFYVQGYSGF GVTPSHIICK ILAEGMLEGS RRYDLVSSVK HARILGKDYL RPLLLTAGKT
VHQLSGYFNG RR
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