Gene PputGB1_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3351 
Symbol 
ID5871136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3772128 
End bp3772883 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID641548467 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001669579 
Protein GI167034348 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC AGAACATACG TGGCCTGGTG TTACCGCTGT TGCTGCTCGG TGCATGGGAA 
TATGCCTCGC GCCAGGGGGC GGCCGGTGCC TATGCCTTCG TGCCACTGGC CCAAGTGGGC
ACGGCACTGA CCGAGCTGCT GGGCAGCGGT GAATTGCTGG TCAACCTGTG GGCGAGCCTG
CTGCGCACCT GCAGCGGCCT GGCCATCGGC ATTGTCGGCG GTGTCGGCCT GGGGGCACTG
ATGGCCCTGT CCGCACCGGC CAACCGCCTG ATCGCGCCGC TGTTCCATGC CCTGCGCCAG
GTACCGATGC TGGGCTGGAT CCCGCTGATT GCCTTGTGGC TCGGTAATGG AGAAGGCGCC
AAGCTGTTGA TCGTCAGTCT GGCGGCGTTG TACCCCATGG TGCTGAACAC CTTCGAAAGC
CTGCGCCAGG TCACTGCCCA GCACCGAGAA GCCGCGCAGG TACTGATGCT CAGCCGCTGG
CAGCAACTGT GGTTGATCCT GCTGCCGGCG GCTCTGCCTG GCATTGCCGC CGGGGTGCTG
CAGGCCTTGG CCTTCGCCTG GGTAACTTCG GTGGGCAGCG AACTGTTCCT GTCCGCTGGT
GCCGGCCTTG GCAGCCTGAT GATGAATGCC GAAGCCACCG CACGCATGGA GATCATCGTG
GTCTGCGTGC TGTGCATCGG CCTGAGTGGC TACCTGATGT CCTGGCTGTG CACCCTGCTC
ACCCGCCGCC TGCTGCGCTG GCGCACCAAC CATTGA
 
Protein sequence
MKLQNIRGLV LPLLLLGAWE YASRQGAAGA YAFVPLAQVG TALTELLGSG ELLVNLWASL 
LRTCSGLAIG IVGGVGLGAL MALSAPANRL IAPLFHALRQ VPMLGWIPLI ALWLGNGEGA
KLLIVSLAAL YPMVLNTFES LRQVTAQHRE AAQVLMLSRW QQLWLILLPA ALPGIAAGVL
QALAFAWVTS VGSELFLSAG AGLGSLMMNA EATARMEIIV VCVLCIGLSG YLMSWLCTLL
TRRLLRWRTN H