| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3335 |
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| Symbol | |
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| ID | 5871120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3749008 |
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| End bp | 3750792 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548451 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001669563 |
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| Protein GI | 167034332 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.488262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGC CTTTGAAGGT CGACAGCGAC GTGTTGCAAG TCAGCGAGCT GCGGGTGGAA
CTGGCTGGGC AGGTCGAGGT GTTGGCCGAG GTTTCCTTCA GCCTGGCGGC AGGGGAGATT
GTCGGCCTGG TCGGCGAGTC CGGCTCAGGC AAGACCACCT TGGCCACGGC ATTGTTGCAG
CACGCCCGGC AGGGCGCGCG CATTGTTGGC GGGCAGGTGG TGGTGGCAGG GCAGTCGGTG
CTGGCACTCG AAGGCGAAGC CTTGCGCCTG GCCCGTGGCG GGCTGGTCGG CTACGTGGCC
CAGGACCCAG CCACGGCGCT GAACCCGGCG TTGCGCCTGG GGGCCTTGCT GCGTGAAACG
CTGCTGGCGC ACCAGCCCAA GCTGTCGCGC GACGCTGTGC GTCAGCGCAT CGGCGAAACC
CTGGTGGAGG TGGGCCTGCC CGATGACGAC GCCTTCCTGC GGCGCTTCCC GCACCAACTG
TCTGGCGGGC AGCAACAGCG GGTGATGCTG GCGCTGGCGT TCGTCCTGCG GCCCCGGTTG
ATCGTGCTCG ACGAGCCTAC TACCGCACTG GACGTCACCA CCCAGGCCCA TGTGTTGCAG
ACCCTCAAGC GCCTGTGCCG TGAACACGGT GTGGCGGCGC TTTACGTCAC CCACGACCTG
GCCGTGGTGC GTGAGCTGGT GGACCGGGTC ATGGTGATGT ACGCCGGGCG GCTGGTGGAG
GTGGCCGGGC GCGAGGCGCT GTTCTGCAAC CCTGCGCACC CTTACACCCG TGCCTTGCTC
GCGGCTATCC CCGACGTTGC CCGGCGTCAG CCGCTGCAGG CGATTGCCGG GCATGCGCCG
GCACCCGGGC AGCGCCCGCA TGGCTGTGCG TTTGCGCCGC GCTGCGACCG GCATCGGGCC
GAGTGTTCGG TGATCGAACC GTCGTTGCTG ACGCTCGAGG GCAAGCATCA GGTCGCCTGC
CTGGTGCCGC ACCAAGAACC GCTGCCCCTT GCGGGGGCGG CTGTCGAGGT TGAATCGGTG
CCGAACGAAG CCGTGTTGCT AGAGGTTCGG GAGCTGGATG TCGCTTACGA TCGCCAGGTG
CTGTTCGATG TTTCATTGCG TGTGGGGCAA GGGGAGTGCC TGGCGCTGGT GGGCGAATCG
GGTTCGGGCA AGACCAGCCT GGCCAGGGCC ATTGCCGGGC TGGGCGAGAA CGTTCAGGGG
CAAATGCGTT ACGCCGGCGA GCCTTTGGCG TTTGCCGCAC GCGAGCGTGA TGCCCGTTTG
CGTCACCAGA TTCAGTATGT GTTCCAGAAC CCTTATCGGG CCTTGAACCC AAGGCAGACG
GTCGGGCAAA CGCTCAGCGC GCCGTTGGCG CACTTTTTCG GTGTGCGTGG TGGTGAGGCG
CGGCGTCGGG TCGAGGCGGT GCTGGAACGG GTGTCGTTGC CGGCTCGGGT GGCGGATTTG
TACCCGCATA GCTTGTCTGG TGGTGAACGG CAACGTGTGG CGATTGCCCG AGCGTTGATC
TGCGAGCCAA GGCTGCTGGT TTGTGACGAG ATTACCTCGG CGCTGGATGT GTCGGTGCAG
GCGTCGATTC TGGCCTTGCT ACAGCGTTTG CAGGGGGAGG GGCTGACCTT GTTGTTCGTC
ACCCATGACC TTGGGGTGGT GCGGGCGATT GCCGACCGGG TGCTGGTGTT GCGACAGGGG
CGGGTGGTGG AGCAGGGGAG TGCCGAGCAG GTGCTTGGGA GGCCGGTTGA TGCGTATACC
CGGACGCTGG TGGAGCATTC GCCTCGGTTG CGTGTTGGCT TCTAG
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| Protein sequence | MNAPLKVDSD VLQVSELRVE LAGQVEVLAE VSFSLAAGEI VGLVGESGSG KTTLATALLQ
HARQGARIVG GQVVVAGQSV LALEGEALRL ARGGLVGYVA QDPATALNPA LRLGALLRET
LLAHQPKLSR DAVRQRIGET LVEVGLPDDD AFLRRFPHQL SGGQQQRVML ALAFVLRPRL
IVLDEPTTAL DVTTQAHVLQ TLKRLCREHG VAALYVTHDL AVVRELVDRV MVMYAGRLVE
VAGREALFCN PAHPYTRALL AAIPDVARRQ PLQAIAGHAP APGQRPHGCA FAPRCDRHRA
ECSVIEPSLL TLEGKHQVAC LVPHQEPLPL AGAAVEVESV PNEAVLLEVR ELDVAYDRQV
LFDVSLRVGQ GECLALVGES GSGKTSLARA IAGLGENVQG QMRYAGEPLA FAARERDARL
RHQIQYVFQN PYRALNPRQT VGQTLSAPLA HFFGVRGGEA RRRVEAVLER VSLPARVADL
YPHSLSGGER QRVAIARALI CEPRLLVCDE ITSALDVSVQ ASILALLQRL QGEGLTLLFV
THDLGVVRAI ADRVLVLRQG RVVEQGSAEQ VLGRPVDAYT RTLVEHSPRL RVGF
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