| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3252 |
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| Symbol | |
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| ID | 5871037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3648698 |
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| End bp | 3650092 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548368 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001669480 |
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| Protein GI | 167034249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.719385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.223004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACAA CAACAAGTAC AGCCCATAGC CCCGCACATA GCCCCACCCC GCATGCACCC
ACACAACCCG ACGCCAGCAC CGGCCGCTTG CGCAAGTCCA TGGGGATGAC CGCCCTGGTG
CTGTTCGGCC TGGCCTACAT GGTGCCCCTG GCCGTATTCA CCACCTACGG GCTGGTCACT
CAGATGACCA AAGGGCACCT GCCCACCGCC TACCTGCTGA CCCTCGCCGC CATGCTGCTG
ACCGCCTACA GCTATGGCCG CATGGTCCAG GCCCACCCCT ACTCCGGGTC GGTCTACACC
TACACGCGCA AAGCCTTCGG TAGCCACATC GGCTTCATCA CCGGCTGGAC ATTGCTGCTT
GACTACATCT TTCTACCGCT GCTCAGCTAC CTGCTGATCG GCATCTATAT GTCGGAATAC
TTCCCGGCCA TCCACGCCTG GGTGTGGGTG GCCGGCTCCA TAGCCCTGGT CACCTTCCTC
AACCTGATCG GTATCGAGTC GATCACCCGG GTCAACTGGA TCCTGGTGGT GGTGCAGCTG
GTGTTCATCA TCGTCTTCGT CGCCCTGTCC GTGCTCAAGC TCAGTGGGCA GGCAGAGCCG
GTGTCGCTGC TGGCGCCCTT TCACCACGAA GGCTTCAGTG TGCCGCTGAT CATGACCGGC
GCCGCCGTGC TGTGCCTGTC GTTCCTCGGC TTCGACGCGG TGTCGACCAT GGCTGAGGAA
ACCAGCAACC CGACCTACCG CATTCCCGTG GCGATTCTGG CCGTGTCGCT GATCGGTGGC
CTGCTGTTCC TGGTAGTGTC GTACTGCGCA CAGATGGTGT TCCCCGACTG GGGCAGCTTC
GCCGACCCCG ATTCGGCCTC GGTGGACGTG ATGCGCCGGG TCGGCGGCGA GCTGCTGGTA
ACCGCGTTCA CCGCCACCTA CGTGGCCGGC TGCTTCGCCT CGGCCATGGT GTCCCAGGCC
AGCGTATCGC GCGTGCTGTT CGCCATGGGC CGCGACGGCG CATTGCCGCG GGCGTTCGGC
CAGCTGGCGA CGAAAAAGCG CGTGCCGGCC ACGGCCATCC TGGTGGTCAG CCTGGTGTCG
ATGATCGCCC TGGTGATTAC CCTCGATACC GTCGCCAACA TGATCAGCTT TGGCGCGCTG
TTCGCCTTCT CGGCGGTGAA CTTGGCGGTG GTCAAGCACT ACCTGGTCGA CCAGAAACTG
CGCGGCGGCC GCAACTACTT GCTGTACGGT GCCATTCCTG GGCTGGGTTT TCTCAGCACG
CTGTGGCTGT GGAGCAGCCT GACCAGCCTG TCGTTCACCA TTGGCCTGTG CTGGCTGGGC
ATGGGCCTGG TAGTGCTGAT GGGCCTGACG CGCGCATTCC GGGTGAAATT GCCGGAGTTG
CAGATGGCCG AATGA
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| Protein sequence | MHTTTSTAHS PAHSPTPHAP TQPDASTGRL RKSMGMTALV LFGLAYMVPL AVFTTYGLVT
QMTKGHLPTA YLLTLAAMLL TAYSYGRMVQ AHPYSGSVYT YTRKAFGSHI GFITGWTLLL
DYIFLPLLSY LLIGIYMSEY FPAIHAWVWV AGSIALVTFL NLIGIESITR VNWILVVVQL
VFIIVFVALS VLKLSGQAEP VSLLAPFHHE GFSVPLIMTG AAVLCLSFLG FDAVSTMAEE
TSNPTYRIPV AILAVSLIGG LLFLVVSYCA QMVFPDWGSF ADPDSASVDV MRRVGGELLV
TAFTATYVAG CFASAMVSQA SVSRVLFAMG RDGALPRAFG QLATKKRVPA TAILVVSLVS
MIALVITLDT VANMISFGAL FAFSAVNLAV VKHYLVDQKL RGGRNYLLYG AIPGLGFLST
LWLWSSLTSL SFTIGLCWLG MGLVVLMGLT RAFRVKLPEL QMAE
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