| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3247 |
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| Symbol | |
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| ID | 5871032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3639666 |
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| End bp | 3641456 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641548363 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001669475 |
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| Protein GI | 167034244 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.376143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCC TACAACTCCA GTTGCACAGC GCCCGCCAGC AGTTCGCCGA AGGCCTGCCG
TTGCCCGCCG GGCTGCTGCC GGAACCTATC GAGCGCTCGT GGGAGCGTTC CAGGGCCGCC
GGGCTCAGCC CGTGGCAACC GCGCCTGGCA CACGGGCAGC TGGATGTGCT GCCACTGACC
GAGGCCGACA GCCAACTGGC TGCCTGCGTG CAACCAGAGC TGGAACGGTT ATGGGAGCTG
ATTGGCGATT CGCACTGGAT GCTGTTTTGC GTCAACCCGG ATAACCGCAT TGTCCAGACC
CGCAAGCCAT CAGGCATCGA CGGCCCGTTG TCGGCCCTGC ACACCGGGCG CCGGGTCAGC
GAGGTCGACG TCGGCACCAC TGCCCCGGCC TGCACGCTGA TGGACGGCCT GCCGGCGATC
GTTGCCGGCA ACCAGCATTA CCTGCAGGAG TTTGCCCAGT TTTTCTGCGT CAGCGTGCCA
TTGCGCGGGG TCAATGGCGA GCTGCTCGGG GCGCTGGACC TGACCGGTAT CGGCACACGC
AATGCCGGGA CCATGCTCGA ACGCCTCAAA CATGCGGCGC TGGCGACTGA AAACAATTTC
TTCCACGGCC TGCCGGGCTG CCGCATCCTG GAGCTGCAAC ACGACCCAAG GCTGCTCGGC
TCGCCACTGC AGGCGCTGCT GGCCGTGCAC GACGATGGCA CGGTGTACGC AGCCAACCGC
GCCGCACAGC AGTTGCTGGG CGTGCCCAGC TACCGCCCTG AAGGGCTGAC GCTGGAGCAA
CTGTTCGACC GCCCTGGCCA CAACGGCCTG GATGGCTCGC CGCAGCTGCT GGCCTTGGCC
GACGGCTCAC GCCTGTATGG CCGGCTATTG GCGCAGCCTG CCGCCAAGCC ACGGCCACTG
CGGGCCAGCC ACACGGCGCT GGGCAGCGAC CGGCGGGTCA ACGCCCGCTT CGCAGATGCC
TGCAAGGCCG TGGCTGGAAA CCTGCCGGTG CTGATCACCG GGCCGACCGG TTCTGGTAAA
GAAGTGTTCG CCAAGGCGCT GCACGAACAC TGCTGCCCAC AGGCCCCGTT CATTGCAATC
AACTGCGCAG CCCTGCCCGA GAGCCTCATC GAAGCTGAAC TGTTCGGCTA CACCGAAGGC
AGCTTCACTG GCGCTCGCAA AGGCGGCGCC GTGGGCCTGC TGGAGTCCGC CGGCGACGGC
ATCTTGCTGC TGGACGAAAT CGGTGACATG CCGTTGGCCC TGCAAAGCCG GCTGCTGCGT
GCCTTGCAGG AGCGGCAGAT CACCCGTGTT GGCAGCACCA GCAGCGTGGC GCTGAAGGCC
CACGTTGTCG CCGCCACCCA CAAGGACCTC GCCAGCCTGG TGAGCAGCGG CGGCTTTCGC
GAGGACCTGT TCTACCGCCT GGACGGCCTG CGCGTGGCCC TGCCTGCCCT GGAACAGCGC
CTGGACAAGG CGCAACTGAT CGACAATTTT TTCCAGCGCC CAGGCTTCCC GCCGTTGGCG
GCAGAGGCCA GGCGCCAATT GCAGGCCTAC CACTGGCCGG GCAACCTGCG GCAACTGGAC
AACGTGGCGC GCCTGGTCGG GGTGCTGGCC GCTGGCGAAC CGTGCATCGA CCTGCAGCAC
CTTCCCGACG ACCTGCAAGG CCAGGCGCAC GTGACGTCGT GCAACCTTGC CGACGCTACC
CAGGAAGTGA TCGAACGCGT CCTGCTGGCC CATGCCGGTA ACGTCAGCGC CGCCGCCAAG
GAACTCGGTA TCTCGCGCAC TACCTTGTAC AAGCGCCTGG GCAAGCAGTA G
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| Protein sequence | MDRLQLQLHS ARQQFAEGLP LPAGLLPEPI ERSWERSRAA GLSPWQPRLA HGQLDVLPLT
EADSQLAACV QPELERLWEL IGDSHWMLFC VNPDNRIVQT RKPSGIDGPL SALHTGRRVS
EVDVGTTAPA CTLMDGLPAI VAGNQHYLQE FAQFFCVSVP LRGVNGELLG ALDLTGIGTR
NAGTMLERLK HAALATENNF FHGLPGCRIL ELQHDPRLLG SPLQALLAVH DDGTVYAANR
AAQQLLGVPS YRPEGLTLEQ LFDRPGHNGL DGSPQLLALA DGSRLYGRLL AQPAAKPRPL
RASHTALGSD RRVNARFADA CKAVAGNLPV LITGPTGSGK EVFAKALHEH CCPQAPFIAI
NCAALPESLI EAELFGYTEG SFTGARKGGA VGLLESAGDG ILLLDEIGDM PLALQSRLLR
ALQERQITRV GSTSSVALKA HVVAATHKDL ASLVSSGGFR EDLFYRLDGL RVALPALEQR
LDKAQLIDNF FQRPGFPPLA AEARRQLQAY HWPGNLRQLD NVARLVGVLA AGEPCIDLQH
LPDDLQGQAH VTSCNLADAT QEVIERVLLA HAGNVSAAAK ELGISRTTLY KRLGKQ
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