Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3246 |
Symbol | |
ID | 5871031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3638692 |
End bp | 3639582 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548362 |
Product | putative signal peptide |
Protein accession | YP_001669474 |
Protein GI | 167034243 |
COG category | [C] Energy production and conversion |
COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.620994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAGA ACTCCAGCCT TGCCTGGGGC ATGCTGGCCT GCGTGCTGGT TTCAGCCAAG GCCCTGGCTG TCGATGTGAA TGCCGGCGAC TACACGGCGC TGCCCCCAGG CACCAACGTC GCCGCCTGGT ACCAGCAATT CAGCCGCGCC GACCGCTTCA ACGGCGACGG TGCGCCCGAC GCCACGCACG GCACCAGCCT GCGTTCCAAC ATCAGCATCC TGCGCCTGAT CCACTTCACC GAAATCGGCG GTATCACGGT GGACCCGCAA TTGCTGCTGC CCTTTGGCCA TGTCTACGAC GTGAAGGTTG GCGGGCAGTC GCTGGGCAGC AACAGCGGCA TGGCCGACCC GATCATCGGT GCCACCTTCT GGCTGGTAAA CCAGCCTGGG CTGGGCGCCA GCGGCCGCTA CTTCGGCATT ACCCCACTGC TGTACCTGCC GTGGGGCCAA TACGACCGCG GCGCCGGTGT GAACCTGGGC GAAAACCGCT GGAAAGGCGA CCTGCAACTG GGCTGGGTAG AACCGCTGTG GGGCCGCTGG TCCATGGAGT GGTATGCCGA TGCCGTGTTC TATGGCAGCA ACGACAAGGC CGGCAGCGGC AGCCAGACAT TGCGCCAGGA CACGACCTAC CAGTTGCAGA CCAACCTGCG CTACGACTTC AACCCGGCCC AGCGCCTGGC CCTGGGCTTC TCCGCCAGCG AAGGCGGCAA GCAGCACCTG TCGGGCGACT ACACGGGGCA GAAGACCGAG GTGCAGCAAG TGCGTCTGGA GTTTCAGCAG ATGGTCGGCA GCACCGTGCA GTTGAGCGGC CAGCTGACCC ACGACACCCG CGTGGTCGGT GGTTTCCAGG AGGACACCGG GGTCAACCTG CGGGCGCTGC TGCTGTTCTG A
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Protein sequence | MIKNSSLAWG MLACVLVSAK ALAVDVNAGD YTALPPGTNV AAWYQQFSRA DRFNGDGAPD ATHGTSLRSN ISILRLIHFT EIGGITVDPQ LLLPFGHVYD VKVGGQSLGS NSGMADPIIG ATFWLVNQPG LGASGRYFGI TPLLYLPWGQ YDRGAGVNLG ENRWKGDLQL GWVEPLWGRW SMEWYADAVF YGSNDKAGSG SQTLRQDTTY QLQTNLRYDF NPAQRLALGF SASEGGKQHL SGDYTGQKTE VQQVRLEFQQ MVGSTVQLSG QLTHDTRVVG GFQEDTGVNL RALLLF
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