Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3197 |
Symbol | bcsA |
ID | 5870982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3579778 |
End bp | 3582387 |
Gene Length | 2610 bp |
Protein Length | 869 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641548313 |
Product | cellulose synthase catalytic subunit |
Protein accession | YP_001669425 |
Protein GI | 167034194 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | [TIGR03030] cellulose synthase catalytic subunit (UDP-forming) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.611786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCTTGA CTCCTCTGTC GGCCTATACG TGGTTCACCG CCCGTGGTGC GCGGCTACCG GTTGCCTGGC TGTTTACCTT GGGCGTGTGG CTGGCCTTTC TGTTCCTGCG CCTGGAGTCA CCCGCCTGGC AGGCATTGCT GGCCGAACGC CAACGCCTGT ACCCGCAGCT TTCAGGCAAG CGCCCGAGCC TGGGTGACCC GCTACGGCTG CTGATCCAGA GCCTGTGGTT GCTGGTGCGC CGTCAACCGG TGGCACGCAC AACAGGGCCT GGCCGCCGAG CATGGGGCGC AGCGCGCTTG CGACTGCGGG GTGTTGGCCA GGTTGGGCGC CATTACCGAG GGCTGCTGAT CGATGCACTG CATCGGGTGC CCGCGCGCTA CCGCGCCAGT GCTTTCAGGC ACGAAGCCTC GGCACGCCTG CGCGGCCTTA GCGTGCTCGC CAGGCGGGTG TTCTACAGCG TGTTGACGGT GTGCGCCGCA AGCCTGGCCC TGCTGTGCGT GACTGAACCG TTCGGCTACC TGGCGCAACT GATGTTCATC TGCCTGTTGC TGGGCATTGC CATGCTGGTG CGACACATGC CGGGGCGCTT CCCGACCCTG ATGCTGATCG TGCTGTCGAC CATTATCTCG TGCCGCTACC TGTGGTGGCG CTACACCTCG ACCCTGAACT GGAACGACAC CACCGACCTG GTGTTCGGGG TGATTCTGTT GGCGGCCGAA ACCTATTCGT GGTTCGTATT GATCCTGGGT TACATCCAGA CCAGCTGGCC GTTGCAGCGC AAACCGGCCA ACCTGCCGGC CAACCCGCAG CACTGGCCGA CTGTCGATTT GTTGATTCCT ACCTACAACG AAGACCTGTC GGTGGTGCGC ACCACGGTAC TGGCCGCGCT GGGCCTGGAC TGGCCGCGCG AGTGCCTGCG CATCTACATC CTCGATGACG GCCGCCGTGA TGCGTTTCGT GCTTTTGCCG ACGAAGCCGG GGTGGGCTAC ATCGTGCGGC CCGACAGCAA GCACGCCAAG GCCGGCAACC TCAACCATGC GCTGGGTGTG ACCGACAGCG AGCTGATCGC CATCTTCGAC TGCGACCACG TGCCGGTGCG CTCCTTCCTG CAAATGACCG TGGGCTGGTT CCTCAAAGAC CCGAAGTTGG CGCTGGTGCA GACACCGCAC CATTTCTTCT CGCCCGACCC GTTCGAGCGC AACCTCGGCT CGTTCCGCCG TCGCCCCAAT GAAGGCGAAC TGTTCTACGG CTTGATTCAG GATGGCAACG ACATGTGGAA CGCGGCGTTT TTCTGCGGCT CGTGTGCCGT GCTGCGCCGC ACCGCATTGG AAAGCATCGG CGGTTTTGCC GTCGAGACCG TGACCGAAGA CGCCCACACC GCCCTGCGCA TGCACCGCCA GGGGTGGTCG TCGGCTTACC TGAGCATTCC GCAGGCCGCG GGCCTGGCCA CCGAAAGCCT GTCGGCGCAC ATTGGCCAAC GCATTCGCTG GGCCCGTGGC ATGGTGCAGA TCTTCCGCAC CGACAACCCG TTGTTCGGGC GTGGGCTCAG CCTGTTCCAG CGGGTGTGCT ATGCCAACGC CATGCTGCAC TTCCTGGCCG GCTTGCCACG GCTGATATTC CTGACCGCGC CGCTGGCGTT CCTGTTGCTG CATGCCTACA TCATCTACGC ACCGGCGTTG ATGATTCTGC TGTACGTGCT GCCGCACATG ATCCACGCCA GCCTGACCAA CTCGCGCATG CAGGGCAAGT ACCGGCAAAC CTTCTGGGGC GAGGTGTACG AGACCGTGCT GGCCTGGTAC ATCGCCCGCC CGACCACGGT GGCGCTGTTC GCGCCGAAAA AGGGCAAGTT CAACGTCACC GCCAAAGGCG GCCTGATGGA GCAGGCGCAG TTCGACTGGC GTATCGCCCA GCCTTACCTG TGGTTGGCGG CGCTCAACGT GGTTGGCCTG GGCTTTGCCG TGTGGCGCCT GTTCACCGGC CCCACGGCAG AAATCGGCAC GGTGATCGTC AGCTCGCTGT GGGTGATCTA CAACCTGCTG ATCATTGGCG CCGCCGTTGC CGTGGCCGCC GAAGTGCGCC AGGTGCGCCG TGCCCACCGC GTGCAGATGC GCTTGCCGGC GGGGCTGGTA CTGGCCAGCG GTCATGCCTA CCCCTGCACC CTGGTCGATT ACTCCGATGG CGGTGTCGGC CTGCAGGTGC AGCAAGACCT AGAGCTGAAA CCGGGGGAAC AGGTACGTCT GCTGCTCAAT CGCGGCCAGC GTGAGTTCGC CTTCCAGGCG TGTGTCACCC GTACCGTCGG GCAACACGTG GGCCTGGTGT TCCATGCACT TGACCAGCAA CAGCGCATCG ATCTGGTCCA CTGCACCTTT GCCCGTGCCG ATGCCTGGCT TGGCTGGAGC GAGCAGCATG AGGTGGAGCG CCCGCTGCGC AGCCTGATCG ATGTACTGAA GCTGGGCGGT GTCGGTTACC TGCGCCTGTT CGAGCACATG CCACCCTGGC TGAGGGCGCG CTTGCGCCCA CTGCGTACGC TGGCGCTGTG GTTGGCCAGC TATGGGCCCC GCACACCGCG GGCAATCCCT TCCATGAACC CTGTTGATCG AGACGCATGA
|
Protein sequence | MTLTPLSAYT WFTARGARLP VAWLFTLGVW LAFLFLRLES PAWQALLAER QRLYPQLSGK RPSLGDPLRL LIQSLWLLVR RQPVARTTGP GRRAWGAARL RLRGVGQVGR HYRGLLIDAL HRVPARYRAS AFRHEASARL RGLSVLARRV FYSVLTVCAA SLALLCVTEP FGYLAQLMFI CLLLGIAMLV RHMPGRFPTL MLIVLSTIIS CRYLWWRYTS TLNWNDTTDL VFGVILLAAE TYSWFVLILG YIQTSWPLQR KPANLPANPQ HWPTVDLLIP TYNEDLSVVR TTVLAALGLD WPRECLRIYI LDDGRRDAFR AFADEAGVGY IVRPDSKHAK AGNLNHALGV TDSELIAIFD CDHVPVRSFL QMTVGWFLKD PKLALVQTPH HFFSPDPFER NLGSFRRRPN EGELFYGLIQ DGNDMWNAAF FCGSCAVLRR TALESIGGFA VETVTEDAHT ALRMHRQGWS SAYLSIPQAA GLATESLSAH IGQRIRWARG MVQIFRTDNP LFGRGLSLFQ RVCYANAMLH FLAGLPRLIF LTAPLAFLLL HAYIIYAPAL MILLYVLPHM IHASLTNSRM QGKYRQTFWG EVYETVLAWY IARPTTVALF APKKGKFNVT AKGGLMEQAQ FDWRIAQPYL WLAALNVVGL GFAVWRLFTG PTAEIGTVIV SSLWVIYNLL IIGAAVAVAA EVRQVRRAHR VQMRLPAGLV LASGHAYPCT LVDYSDGGVG LQVQQDLELK PGEQVRLLLN RGQREFAFQA CVTRTVGQHV GLVFHALDQQ QRIDLVHCTF ARADAWLGWS EQHEVERPLR SLIDVLKLGG VGYLRLFEHM PPWLRARLRP LRTLALWLAS YGPRTPRAIP SMNPVDRDA
|
| |