| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3158 |
|---|
| Symbol | |
|---|
| ID | 5870943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 3533362 |
|---|
| End bp | 3534027 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641548274 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001669386 |
|---|
| Protein GI | 167034155 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACC TGCTGACCAA CGTCGACTGG GCGGAAATCG CCCAGGCCTG CCTGGAAACG
CTCAGCATGC TGGGCGCCGC ACTGGGCTTT ACCGTGCTCT TCGGCCTGCC CCTTGGCGTA
CTGCTGTACC TGACCGGGCA GCGCCAGTTA CTGGCGCACG ACCCGCTGTA CCGAACCTTG
TCGGTGGTGG TCAACGTGCT GCGCTCGCTG CCGTTCATCA TCCTGCTGAT CGTGCTGATT
CCGCTGACCA CCCTGCTGAC CGGCACGTCG CTGGGCGTGA AGGGCACCAT CCCGCCGCTG
GTGGTCGGCT GCACGCCATT CTTCGCCCGC CTGGTAGAAA CCGCGCTGCG CGAAGTGGAC
CGTGGCCTGG TCGAAGCCAG CCAGGCCATG GGCGGCAGCA TCGCGCAGAT CATCCGCTAC
ACCTTGCTGC CCGAAGCGCG CACCGGGCTG ATCGCGGCGG TCACCGTCAC CGCCATCGTG
CTGGTCGACT ACACCGCCAT GGCCGGGGTG ATCGGCGGCG GCGGCCTGGG CGACCTGGCG
ATCCGCTTCG GTTACCAACG CTTCCAGACC GATGTGATGG TGGTCACCGT GCTGCTGCTG
ATCCTGCTGG TGCAGCTGCT GCAGATGAGC GGTGACCGCC TGGTAAGACA CTTCACCCGC
CGCTGA
|
|---|
| Protein sequence | MNDLLTNVDW AEIAQACLET LSMLGAALGF TVLFGLPLGV LLYLTGQRQL LAHDPLYRTL
SVVVNVLRSL PFIILLIVLI PLTTLLTGTS LGVKGTIPPL VVGCTPFFAR LVETALREVD
RGLVEASQAM GGSIAQIIRY TLLPEARTGL IAAVTVTAIV LVDYTAMAGV IGGGGLGDLA
IRFGYQRFQT DVMVVTVLLL ILLVQLLQMS GDRLVRHFTR R
|
|---|
| |