Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3107 |
Symbol | |
ID | 5870892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3475594 |
End bp | 3476544 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548223 |
Product | hypothetical protein |
Protein accession | YP_001669335 |
Protein GI | 167034104 |
COG category | [S] Function unknown |
COG ID | [COG2307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCGC GAACCGCTTC GGACCTGTAC TGGATGTCCC GCTACCTGGA ACGTGCAGAA AACCTCGCGC GCATGCTCGA GGTCAGCTAT TCGCTGTCGC TGATGCCACA GGCTGGGCGC AGCGACGGCC ATGCCGAGCT GGCGATGTCG CTGTTGGCCT CCGGCACACT GGACGACTAC ATCCGCCGGC ACACCGAGCT CGACACCGAG CGCATGCTGC ACTTCTTCGC CCTCGACGCG ACCAACCCCA GCAGTATCTA TTGCTGCCTG CAGGCCGCCA GGACCAATGC CCATGCGGTG CGCGGCCGGA TCACCGCCGA CATGTGGGAG AACATCAATG CCACCTGGAT CGAAATGCGC AACATCGCCA GCAATGGCCT TGGCCGCTAT GGCATCAGCC AGTTCTGCGA CTGGGTCAAG GAGCGCTCGC ACCTGTTCCG TGGCGCGACC TCCGGCACCA TCATGCGCAA CGACGCCTAC AGTTTCATCC GCCTGGGGAC CTTCCTGGAA CGGGCGGACA ACACCCTGCG CCTGCTCGAT GCGCGCTACG AAATGTTCGG CGAGGCTTCC GAAGAGGTCA GCGACAGCTC CGCCCGCGGT TATTACCAAT GGAGCGCCCT GCTGCGGGCG CTGACCTCGT ATGAAGCCTT CAACGAGCTG TATCGCGCGG CGCCCAGTGC CCGGCCGGTG TCCGAGCTGC TGTTGTTGCG GGTGGACGTG CCGCGCTCGC TGCATGCCTG CATCGAGGAG CTGGACCTGA TTCTGGCCGG CCTGCCCGGC AGCAGTGGGC GCGCCGCCCA GCGCATGGCC GCCGAACTCA ATGCGCGCCT GCGCTACACC GCCATCGACG AAGTCCTCGA CGCAGGCTTG CACGCCTGGT TGACCGACTT CATCGGCCGC GTCAACCAAC TGGGCCAGGC GGTCCATCAC TCCTACCTGG AGGTTGTATG A
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Protein sequence | MLSRTASDLY WMSRYLERAE NLARMLEVSY SLSLMPQAGR SDGHAELAMS LLASGTLDDY IRRHTELDTE RMLHFFALDA TNPSSIYCCL QAARTNAHAV RGRITADMWE NINATWIEMR NIASNGLGRY GISQFCDWVK ERSHLFRGAT SGTIMRNDAY SFIRLGTFLE RADNTLRLLD ARYEMFGEAS EEVSDSSARG YYQWSALLRA LTSYEAFNEL YRAAPSARPV SELLLLRVDV PRSLHACIEE LDLILAGLPG SSGRAAQRMA AELNARLRYT AIDEVLDAGL HAWLTDFIGR VNQLGQAVHH SYLEVV
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