Gene PputGB1_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3038 
Symbol 
ID5870823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3386121 
End bp3387416 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content59% 
IMG OID641548154 
Producthypothetical protein 
Protein accessionYP_001669266 
Protein GI167034035 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA TGGTGCTTGG AGCAGCCCTG CTTTCGCTTG CCGTGCCGGC CTTCGCACAG 
ATCCCCGACA AGCTGGCGGA AGATGCCTAC ATCTATGGTT ACTCCATGGA CGAGGCCTAC
AAGTTCTTCT ATGAGACGGC AGTCAAGACC AACACGCCGC TCAATCGCTT TCAGAACATC
CGCCACCTGG CCGATGACAC CTACGTCGAT CACCCGACCA TCAACAATGA CACGCTGCAC
TTGATGGGCT GGCTGGATAT CGCCGCAGAA CCCGTGATCG TCAGCGTTCC GGACATGGAA
AAAGGTCGTT ACTGGATCCT GCACACCATG GACATGGGCC ATTACACGAC GTCCATGATC
GGCTCCCGCA CGCGGGACAC CAAAGGCGGC CACTTCATGT TCGCCTCACC CCAGTGGAAG
GGCACGGTGC CCGATAGTGT CACCGAAGTG ATCCGTGTCG AGTCCAACCT GGTTAAATTG
ATGGGCAGGA TCATGTCCAC CGGGCCTGAG GACCAGAAAA AGGCGCTTGC CTACATGGAT
GACTGGAACG TCCGTACGCT TTCGGCCTAC CTGGGCGAGC CCGGCCCAAA AGCCAAGCAG
CGCACTTACC CCGACCCAGC CAAGACCAAT TGGCTGCAAC GGGTGAACTT CGTGCTGTGT
GACGGCAACA TGGGCCAGGC CGACAAGAAA TGGCTCGACC AGTACAAGTC AGTCGGCGTC
GAACCCTGCA AAGAAAACTT CACCAAGGAG CAGCTGGCAG CTGCGAAGAA GGGTGAGGAA
CTGGGCATGA AGCACATCAA GGACCTCGCT CCGAAGATGA CCGACGCCGG CAAGCTGCTG
GGCACCCGCG AGCAGTTGGT TGACGGCCCC CGTGACCTGT TCGCCGAGGG CACCTACATC
GGCCAGTGGG GGCTGCCCCC AGATGAAAGT ATCTACCTGC GCACCGAGAC CGCTGCCGAC
GGTAAGCCGA TCAATGGTGC CAATGGTAAG TCGTACGCCA TGCACTTCAA GGCGCCCGAG
GTCAGCCAGT TCTGGTCCTT TACCGTCTAC GCCTCAGACA ACCGCCTGAT GGCCCACAAC
GCCATCAATC GCCATAGCCG CGGCGACCGC ACACTCAAAC CGGATGCCAA TGGCGAATAC
ACCATTGAGC TGAGCGCCAA GGGTGAAGAG AGCAACCCCA ATTACCTGCC AATTCCGGAA
AAGGATGCCT ACATTGTCTT GAGGTTGTAT GGCCCGAGCA AGGCAGTGCA AGGCGGCGGG
TACAAGTTCC CGCCCGTCGA AGTGACCTCG CACTGA
 
Protein sequence
MKPMVLGAAL LSLAVPAFAQ IPDKLAEDAY IYGYSMDEAY KFFYETAVKT NTPLNRFQNI 
RHLADDTYVD HPTINNDTLH LMGWLDIAAE PVIVSVPDME KGRYWILHTM DMGHYTTSMI
GSRTRDTKGG HFMFASPQWK GTVPDSVTEV IRVESNLVKL MGRIMSTGPE DQKKALAYMD
DWNVRTLSAY LGEPGPKAKQ RTYPDPAKTN WLQRVNFVLC DGNMGQADKK WLDQYKSVGV
EPCKENFTKE QLAAAKKGEE LGMKHIKDLA PKMTDAGKLL GTREQLVDGP RDLFAEGTYI
GQWGLPPDES IYLRTETAAD GKPINGANGK SYAMHFKAPE VSQFWSFTVY ASDNRLMAHN
AINRHSRGDR TLKPDANGEY TIELSAKGEE SNPNYLPIPE KDAYIVLRLY GPSKAVQGGG
YKFPPVEVTS H