Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3038 |
Symbol | |
ID | 5870823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3386121 |
End bp | 3387416 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641548154 |
Product | hypothetical protein |
Protein accession | YP_001669266 |
Protein GI | 167034035 |
COG category | [S] Function unknown |
COG ID | [COG5361] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCA TGGTGCTTGG AGCAGCCCTG CTTTCGCTTG CCGTGCCGGC CTTCGCACAG ATCCCCGACA AGCTGGCGGA AGATGCCTAC ATCTATGGTT ACTCCATGGA CGAGGCCTAC AAGTTCTTCT ATGAGACGGC AGTCAAGACC AACACGCCGC TCAATCGCTT TCAGAACATC CGCCACCTGG CCGATGACAC CTACGTCGAT CACCCGACCA TCAACAATGA CACGCTGCAC TTGATGGGCT GGCTGGATAT CGCCGCAGAA CCCGTGATCG TCAGCGTTCC GGACATGGAA AAAGGTCGTT ACTGGATCCT GCACACCATG GACATGGGCC ATTACACGAC GTCCATGATC GGCTCCCGCA CGCGGGACAC CAAAGGCGGC CACTTCATGT TCGCCTCACC CCAGTGGAAG GGCACGGTGC CCGATAGTGT CACCGAAGTG ATCCGTGTCG AGTCCAACCT GGTTAAATTG ATGGGCAGGA TCATGTCCAC CGGGCCTGAG GACCAGAAAA AGGCGCTTGC CTACATGGAT GACTGGAACG TCCGTACGCT TTCGGCCTAC CTGGGCGAGC CCGGCCCAAA AGCCAAGCAG CGCACTTACC CCGACCCAGC CAAGACCAAT TGGCTGCAAC GGGTGAACTT CGTGCTGTGT GACGGCAACA TGGGCCAGGC CGACAAGAAA TGGCTCGACC AGTACAAGTC AGTCGGCGTC GAACCCTGCA AAGAAAACTT CACCAAGGAG CAGCTGGCAG CTGCGAAGAA GGGTGAGGAA CTGGGCATGA AGCACATCAA GGACCTCGCT CCGAAGATGA CCGACGCCGG CAAGCTGCTG GGCACCCGCG AGCAGTTGGT TGACGGCCCC CGTGACCTGT TCGCCGAGGG CACCTACATC GGCCAGTGGG GGCTGCCCCC AGATGAAAGT ATCTACCTGC GCACCGAGAC CGCTGCCGAC GGTAAGCCGA TCAATGGTGC CAATGGTAAG TCGTACGCCA TGCACTTCAA GGCGCCCGAG GTCAGCCAGT TCTGGTCCTT TACCGTCTAC GCCTCAGACA ACCGCCTGAT GGCCCACAAC GCCATCAATC GCCATAGCCG CGGCGACCGC ACACTCAAAC CGGATGCCAA TGGCGAATAC ACCATTGAGC TGAGCGCCAA GGGTGAAGAG AGCAACCCCA ATTACCTGCC AATTCCGGAA AAGGATGCCT ACATTGTCTT GAGGTTGTAT GGCCCGAGCA AGGCAGTGCA AGGCGGCGGG TACAAGTTCC CGCCCGTCGA AGTGACCTCG CACTGA
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Protein sequence | MKPMVLGAAL LSLAVPAFAQ IPDKLAEDAY IYGYSMDEAY KFFYETAVKT NTPLNRFQNI RHLADDTYVD HPTINNDTLH LMGWLDIAAE PVIVSVPDME KGRYWILHTM DMGHYTTSMI GSRTRDTKGG HFMFASPQWK GTVPDSVTEV IRVESNLVKL MGRIMSTGPE DQKKALAYMD DWNVRTLSAY LGEPGPKAKQ RTYPDPAKTN WLQRVNFVLC DGNMGQADKK WLDQYKSVGV EPCKENFTKE QLAAAKKGEE LGMKHIKDLA PKMTDAGKLL GTREQLVDGP RDLFAEGTYI GQWGLPPDES IYLRTETAAD GKPINGANGK SYAMHFKAPE VSQFWSFTVY ASDNRLMAHN AINRHSRGDR TLKPDANGEY TIELSAKGEE SNPNYLPIPE KDAYIVLRLY GPSKAVQGGG YKFPPVEVTS H
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