| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3036 |
|---|
| Symbol | |
|---|
| ID | 5870821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 3383714 |
|---|
| End bp | 3384271 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641548152 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001669264 |
|---|
| Protein GI | 167034033 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGTC TTCCGACGCT GATCACCGAT CGGCTGGTTC TCACCCCTCT CCAATTGGAG
GATTCACCCA TCATTCAGGA GCTATTCCCC TGCTGGGAGG TGGTTCGCTA CCTGGATCGT
CGTGTCCCAT GGCCGTATCC AGAAGACGGG GCGCTGGTTT ATGTCCGAGA TATCGCCCTG
CCTGCTATGG CAGCAGGTCG TGAAAGGCAC TGGATGATCC GCATGCGCAA CGATGCTGGC
TGCACCCTGG GTAGCATCAG TTTGTATGAT CAGCCTGGAA ACAACAGAGG CTTCTGGCTC
GCACCACAGT GGTGGGGAAA GGGCTACATG CGTGAGGCAT GCCGGATTAT CAATGCCTAT
TGGTTCGAGA CACTGTCGCG TCCGGTCATG CAGGTTCCCA AAGCTGTTGC CAACGACGCA
TCTCGCAGGG TCTCGAAACA TGAGGGTATG CGCTTGGTAG ACGTGCGGGC AGGAGAATTT
GTATCTGGAC TGATGGAGGT CGAAATATGG GAGATGACTC GTGCTGACTG GTTAGAAAGG
TCAATTGCCG GCCGCTAG
|
|---|
| Protein sequence | MDCLPTLITD RLVLTPLQLE DSPIIQELFP CWEVVRYLDR RVPWPYPEDG ALVYVRDIAL
PAMAAGRERH WMIRMRNDAG CTLGSISLYD QPGNNRGFWL APQWWGKGYM REACRIINAY
WFETLSRPVM QVPKAVANDA SRRVSKHEGM RLVDVRAGEF VSGLMEVEIW EMTRADWLER
SIAGR
|
|---|
| |