| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2953 |
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| Symbol | |
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| ID | 5870738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3305626 |
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| End bp | 3306978 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548069 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001669181 |
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| Protein GI | 167033950 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0756027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGAG CGACCGCCGG CGAGTTCGCG TATCGCAAGG TGTATCGCTA CCTGGAAGCA
TTGATCGATC AGGCTGCTGG CGATGGCCCA TGCCGGTTAC CGTCATTGCG TGCGCTGTCC
CGGCGGCTGC GGGTGTCGTT GGCCACGGTA CAGAATGCCT ATAGCCTGCT GGAAGAAGAG
GGCCGCGTGC ACTGCCGGCC GAGGTCGGGC TATTACGTGG ATAACGCTGG CAAAGAACAG
GCCGTGGCTA CGCACAGGCA GCCTCCCTTG CCGGCGCAGC CGCTGTTGGA GCGCATTCTG
CTAGGCCACG AGCGGCGCCT GGCCCGCCAA CGTGACTGCA GCGTTGCACC CTGGGATGCG
CTTGGCAGCA CCCGATTGCG CAATGCCATT GCTGAACGCT ATACCCGCTC CTCCAGCCAG
TACTGGCGTG CCGATGATGT GCAACTGGCC CCCGATGTGC TGGCGTTGAT CGAGACACTG
CTCGCGGCGC TGGCCTTGCA TGGCGGTACT GTGCTGGTAC ATTCGCCCTG TTGCTGGCAG
GTTTTACGCG CCTTGGCGCG TGCTGGCATG CGCGTATTGG AGGTGCCACT GGATGCTCAG
GGCAACCCAG ACCTGCCTGC CTTGGCCAGG TTGCTGGGGA GCGAGCCGGT AAACATGCTG
GTCATGCCAT CGTGCCTGGG CATGCCACAA GGGCGGCTGC TTTCACCGTA CTATCAGCAG
CAGCTTGGTC TATTGCTTGG CCAGTACCCT GTGTGGTTGC TGGAAAACGA CCTGGACAGC
GAACTCTGTT ACAGCGGGCC ACCGAACAAA CGCTTGCGCG ACTGGGTGGA CCCGCGTTGG
CTGTTGGTGA TGGGCACGTT CGAGGCTGCG GTGGGGCCCG AAGCGCCGTA TGCCTATTTA
CTGAGCCGTG ACGCCGAGTT GGCCAAGGCG TTCGCCGAGC GAGCATTTCG GCTGGCGCCG
CTACGCTTGC AGGCGCTTGC GCACATGCTG GGCAAGGGGG AAATCGAGAC GCAATGGGTA
CAGTTACGCC TGGACCTGCA AAGGCGCACG CAATGCCTGG CGCGTGTGCT GGCGTTGCAA
TTCGGCCAGC GGGTGGTGCT GGAGATGCCG CAAGGCGGGC AGATGCTGTG GGTGCGCTTC
CGTCAGCCGC TGGTGTGGGA GGGTATTAAC GCAGCGTTGG CAGGCTCACC GTTGCATGTG
CTGTCCGGCG AGCAGTTCAG CCTGCAGGGG CGCTACACGC AATACCTGGC ATTGATGTGG
TTGGGGGGGC ACCCGGATGA TCTGCAACAG GCGGTAACGC GCTTGGCACA GGCGTTGGAG
CCGCGTTGCG GGCGTCGTAC TCGCAACCTG TAG
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| Protein sequence | MGRATAGEFA YRKVYRYLEA LIDQAAGDGP CRLPSLRALS RRLRVSLATV QNAYSLLEEE
GRVHCRPRSG YYVDNAGKEQ AVATHRQPPL PAQPLLERIL LGHERRLARQ RDCSVAPWDA
LGSTRLRNAI AERYTRSSSQ YWRADDVQLA PDVLALIETL LAALALHGGT VLVHSPCCWQ
VLRALARAGM RVLEVPLDAQ GNPDLPALAR LLGSEPVNML VMPSCLGMPQ GRLLSPYYQQ
QLGLLLGQYP VWLLENDLDS ELCYSGPPNK RLRDWVDPRW LLVMGTFEAA VGPEAPYAYL
LSRDAELAKA FAERAFRLAP LRLQALAHML GKGEIETQWV QLRLDLQRRT QCLARVLALQ
FGQRVVLEMP QGGQMLWVRF RQPLVWEGIN AALAGSPLHV LSGEQFSLQG RYTQYLALMW
LGGHPDDLQQ AVTRLAQALE PRCGRRTRNL
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