| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2952 |
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| Symbol | |
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| ID | 5870737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3304213 |
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| End bp | 3305514 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548068 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669180 |
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| Protein GI | 167033949 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.326593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCC TCACCCGCGC AGCGGCTTCG GCCCCTGCCG CCACGAACGA ACAGCGCCTG
AACAGTTTGC TGCTACGCAG ATTGATGCCA CTGCTCATCG TCGTCTACGT GATGAGCTTT
CTTGACCGCA CCAACATCGC CCTGGCGAAA GCCAGCATGG GCATCGACCT GGGCCTTTCG
GCAGCAGCCT ATGGCCTGGG CGCTGGCTTG TTCTTTCTCA CCTATGCCCT GGCCGAAGTG
CCCAGCAACC TGATCATGCA CCGGGTGGGC GCGCGCTTCT GGATCACCCG CATCATGATT
ACCTGGGGCC TGCTCTCGGC GGGCATGGCC TTCGTCCAGG GTGAAACGTC GTTCTACATC
ATGCGCCTGT TGCTGGGGGT GGCCGAAGCG GGCCTGTTCC CCGGTGTAAT GTTGTACCTG
ACCTACTGGT TCGACCGCGA ACAGCGCGCC CGCGCCACCG GTTACTTCCT GCTGGGCGTG
TGCCTGGCCA ACATCCTCAG TGGCCCGCTG GGCGGTGCCC TGCTGGAAAT GGATGGTGTG
CTGGGCTGGC ACGGCTGGCA GTGGCTGTTC GTGCTCGAGG GCCTGCCTGC CGTGGCCTTG
GCCTTCGTGG TGTGGAAAAA GCTGCCGGAC GGCCCGGCCT CGGCGCCCTG GCTGTCGGCC
GCCGACGCCC AGGACATCGA ACGCCGCCTG GCCGCCGAAC GGGCTGCCGC ACCGCAGCAG
AGCAAGCTGG GGCAGATGTT CCGCGACCGG CAGATCTGGC TGGCGATCGG GGTGTACTTC
GTGCACCAGA TCACCATCTA CACGGTGATT TTCTTCCTGC CCGGCATCAT CAGCACCTAC
GCTGCCCTAT CACCCTTCCA GGTCGGCCTG CTGACAGCAG TGCCCTGGAT TGCCGCTGCC
ATAGGCGCCG CCACCTTCCC ACGCCTGGCC ACCTCACCGC GCCGCTGCCG CACGCTGCTG
TTCTTCGGCC TGTTGACCAT GGCCACCGGG TTGCTGCTGG CATCGCTGAG CAGCTCCTTC
ATTGGCCTGA TCGGTTTTTC CCTTACCGCA CTGATGTTGT TCGTGGTGCA GTCGATCATC
TTTGTCTTCC CCTCCAGCCG TCTGAGCGGT AACGCACTGG CGGCGGGCCT GGCCTTCGTC
ACCACCTGTG GCCTGTTGGG TGGCTTCGTC GGGCCGTCGG TGATGGGGTT GATCGAGCAG
ACCACCGGTA GCACCCGCCA CGGTCTATGG ATCATTGCAG CATTGCTCGT ATTGGCGGCA
CTGGTCAGTA CCCGTTTGCG CCAAGGGCAG GAACAACACT AA
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| Protein sequence | MTTLTRAAAS APAATNEQRL NSLLLRRLMP LLIVVYVMSF LDRTNIALAK ASMGIDLGLS
AAAYGLGAGL FFLTYALAEV PSNLIMHRVG ARFWITRIMI TWGLLSAGMA FVQGETSFYI
MRLLLGVAEA GLFPGVMLYL TYWFDREQRA RATGYFLLGV CLANILSGPL GGALLEMDGV
LGWHGWQWLF VLEGLPAVAL AFVVWKKLPD GPASAPWLSA ADAQDIERRL AAERAAAPQQ
SKLGQMFRDR QIWLAIGVYF VHQITIYTVI FFLPGIISTY AALSPFQVGL LTAVPWIAAA
IGAATFPRLA TSPRRCRTLL FFGLLTMATG LLLASLSSSF IGLIGFSLTA LMLFVVQSII
FVFPSSRLSG NALAAGLAFV TTCGLLGGFV GPSVMGLIEQ TTGSTRHGLW IIAALLVLAA
LVSTRLRQGQ EQH
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