Gene PputGB1_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2928 
Symbol 
ID5870714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3277402 
End bp3278682 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content61% 
IMG OID641548046 
Producthypothetical protein 
Protein accessionYP_001669158 
Protein GI167033927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.692423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGAT CTTTTACGCT TAGAGCTTTT GTGTGTTTCG CTACCCTGGC CCCCGCCACA 
GCACTTTACG CAGCCGCCGA CCCTCAGGTC GAAGCGCTGA AACAGGAACT GATCGAACTC
AAACGTCGGT ACGAGGCACA GCAACAGGCA CTGATGGTGC TGGAGCAACG CGTGCGCCAG
GTTGAGGAGG CCCCTGCAGC GGCGCCGCCC AAACGCCTGG TCAAGTCCCC CGCCGAGGGG
GTGAAGGGTG CGCAGACTGT CGCTTCTGGC ACGCCTGGCA CCACTGGTAG CTCGTACGGG
CAGGCGCTGA CGGCCGATTC CGAACCGGCG CAAAGCGTTT CCAACCTCTA TGACGAAGCC
AGCGGGTTCT TTGGCGGCGG CAAGTTCAGC TTCGAAACAG GCGTCACGTA TACCCATTAC
GATACCCGGG CGCTTACGCT CAATGGCTTC CTGGCGCTGG ACTCGATCTT TCTGGGCAGC
ATCAACCTTG ACCGGATCAA GGCCGACAAC TGGACCCTGG ACATGACTGC GCGCTACAAC
CTGGCGCAGC GTTGGCAGTT CGATATCAAC GTGCCCGTGG TGTACCGCGA GTCCACCTAC
TCGTCTGGCG GCGCCGGTGG CGCCGGGGCC AGTACCTCCG ATGCAACCGT CACTCGCGAC
CCGGAAATTG GCGATGTCAA CGTTGGAGTG GCCTACAAGT TCCTCGACGA GGACGAAACC
TGGCCTGACG CCGTCGCCAC CCTGCGGGTC AAGGCGCCGA CCGGCAAGGA CCCGTATGGC
ATCAAGCTGC GCGAGGTAGA CGGCAACAGC AACCTGTCGG TGCCGGAAAG CCTGCCCACC
GGCAACGGCG TATGGTCGAT CACACCGGGT ATCTCGCTGG TCAAGACCTT CGACCCAGCT
GTGCTGTTCG GCAGCCTGTC CTACACCTAC AACATGCAGG ACTCGTTCAG CGACATCAGC
CCGCAGGTCA ACAGCAAGGT GCCGGGTGAC GTCAAGCTCG GCGACTCGTG GCAGATCGGC
GGCGGTATCG CCTTTGCCCT GAACGAGAAG ATGAGCATGT CGTTCTCGGT GTCCGACCAG
TTCGCCCGCA AGAGCAAGAT CAAACCCGAT GGCGGTGACT GGCAATCGAT CTCCAACAGT
GACTACAACG CCGCCAACTT CAACATCGGC CTGACCTTCG CCGCCACCAA CAACCTGACC
ATCGTGCCCA ACCTGTCCAT TGGTCTGACC GACGATGCCC CAGACTTCTC CTTCAGCCTG
AAATTCCCTT ACTACTTCTG A
 
Protein sequence
MYRSFTLRAF VCFATLAPAT ALYAAADPQV EALKQELIEL KRRYEAQQQA LMVLEQRVRQ 
VEEAPAAAPP KRLVKSPAEG VKGAQTVASG TPGTTGSSYG QALTADSEPA QSVSNLYDEA
SGFFGGGKFS FETGVTYTHY DTRALTLNGF LALDSIFLGS INLDRIKADN WTLDMTARYN
LAQRWQFDIN VPVVYRESTY SSGGAGGAGA STSDATVTRD PEIGDVNVGV AYKFLDEDET
WPDAVATLRV KAPTGKDPYG IKLREVDGNS NLSVPESLPT GNGVWSITPG ISLVKTFDPA
VLFGSLSYTY NMQDSFSDIS PQVNSKVPGD VKLGDSWQIG GGIAFALNEK MSMSFSVSDQ
FARKSKIKPD GGDWQSISNS DYNAANFNIG LTFAATNNLT IVPNLSIGLT DDAPDFSFSL
KFPYYF