Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2928 |
Symbol | |
ID | 5870714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3277402 |
End bp | 3278682 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641548046 |
Product | hypothetical protein |
Protein accession | YP_001669158 |
Protein GI | 167033927 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.692423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCGAT CTTTTACGCT TAGAGCTTTT GTGTGTTTCG CTACCCTGGC CCCCGCCACA GCACTTTACG CAGCCGCCGA CCCTCAGGTC GAAGCGCTGA AACAGGAACT GATCGAACTC AAACGTCGGT ACGAGGCACA GCAACAGGCA CTGATGGTGC TGGAGCAACG CGTGCGCCAG GTTGAGGAGG CCCCTGCAGC GGCGCCGCCC AAACGCCTGG TCAAGTCCCC CGCCGAGGGG GTGAAGGGTG CGCAGACTGT CGCTTCTGGC ACGCCTGGCA CCACTGGTAG CTCGTACGGG CAGGCGCTGA CGGCCGATTC CGAACCGGCG CAAAGCGTTT CCAACCTCTA TGACGAAGCC AGCGGGTTCT TTGGCGGCGG CAAGTTCAGC TTCGAAACAG GCGTCACGTA TACCCATTAC GATACCCGGG CGCTTACGCT CAATGGCTTC CTGGCGCTGG ACTCGATCTT TCTGGGCAGC ATCAACCTTG ACCGGATCAA GGCCGACAAC TGGACCCTGG ACATGACTGC GCGCTACAAC CTGGCGCAGC GTTGGCAGTT CGATATCAAC GTGCCCGTGG TGTACCGCGA GTCCACCTAC TCGTCTGGCG GCGCCGGTGG CGCCGGGGCC AGTACCTCCG ATGCAACCGT CACTCGCGAC CCGGAAATTG GCGATGTCAA CGTTGGAGTG GCCTACAAGT TCCTCGACGA GGACGAAACC TGGCCTGACG CCGTCGCCAC CCTGCGGGTC AAGGCGCCGA CCGGCAAGGA CCCGTATGGC ATCAAGCTGC GCGAGGTAGA CGGCAACAGC AACCTGTCGG TGCCGGAAAG CCTGCCCACC GGCAACGGCG TATGGTCGAT CACACCGGGT ATCTCGCTGG TCAAGACCTT CGACCCAGCT GTGCTGTTCG GCAGCCTGTC CTACACCTAC AACATGCAGG ACTCGTTCAG CGACATCAGC CCGCAGGTCA ACAGCAAGGT GCCGGGTGAC GTCAAGCTCG GCGACTCGTG GCAGATCGGC GGCGGTATCG CCTTTGCCCT GAACGAGAAG ATGAGCATGT CGTTCTCGGT GTCCGACCAG TTCGCCCGCA AGAGCAAGAT CAAACCCGAT GGCGGTGACT GGCAATCGAT CTCCAACAGT GACTACAACG CCGCCAACTT CAACATCGGC CTGACCTTCG CCGCCACCAA CAACCTGACC ATCGTGCCCA ACCTGTCCAT TGGTCTGACC GACGATGCCC CAGACTTCTC CTTCAGCCTG AAATTCCCTT ACTACTTCTG A
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Protein sequence | MYRSFTLRAF VCFATLAPAT ALYAAADPQV EALKQELIEL KRRYEAQQQA LMVLEQRVRQ VEEAPAAAPP KRLVKSPAEG VKGAQTVASG TPGTTGSSYG QALTADSEPA QSVSNLYDEA SGFFGGGKFS FETGVTYTHY DTRALTLNGF LALDSIFLGS INLDRIKADN WTLDMTARYN LAQRWQFDIN VPVVYRESTY SSGGAGGAGA STSDATVTRD PEIGDVNVGV AYKFLDEDET WPDAVATLRV KAPTGKDPYG IKLREVDGNS NLSVPESLPT GNGVWSITPG ISLVKTFDPA VLFGSLSYTY NMQDSFSDIS PQVNSKVPGD VKLGDSWQIG GGIAFALNEK MSMSFSVSDQ FARKSKIKPD GGDWQSISNS DYNAANFNIG LTFAATNNLT IVPNLSIGLT DDAPDFSFSL KFPYYF
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