Gene PputGB1_2900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2900 
Symbol 
ID5870686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3253418 
End bp3254032 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content62% 
IMG OID641548018 
ProductDSBA oxidoreductase 
Protein accessionYP_001669130 
Protein GI167033899 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA CTGTCGATTT CTATTTTGAC CTGGGCAGCC CGGCCAGCTA TCTGGCCTGG 
ACCCAACTGC CGAGCCTGTG TGCCCGCCAA GGTGCCACAC TGCGCTACCA GCCAATTCTG
CTTGGAGGGG TGTTCCAGGC CACCGGCAAC GCCTCGCCGG CGACGATCCC GGCCAAGGGG
CGCTACATGT TTACCGACCT TGCACGCTTT GCCGCACGCT ACGAGGTACC GTTCGGGATG
CCATCAGGGT TCCCGATCAA TACCCTGGCC TTGATGCGCG GCGTGCTGGG TACCCAGTTG
CGTTCACCGG AGCGGTTCGA GGCCCTGTTG TCGGCGCTGT TCAATGGGCT ATGGGCACAA
CGCCGCAACC TGGGCGATAA CGCAGTTCTG GATGAGACGC TGACCCAGGC AGGCTTCGAC
CCGCAGGTAT TTCACGGGTT GACGGCTGAC GGTGAGGTAA AAGCTGCGCT GAAGCAGGCA
ACCGAGGCGG CTGTGGCGCG CGGGGTGTTT GGTGCGCCCA CCTGCTTTGT GGGCGATGCG
ATGTTCTTTG GCCAGGACCG CCTGGACTTT GTCGAAGAAG CGCTGCGTCA GGGCGCCAGC
AGCTTCTCCA GCTGA
 
Protein sequence
MNKTVDFYFD LGSPASYLAW TQLPSLCARQ GATLRYQPIL LGGVFQATGN ASPATIPAKG 
RYMFTDLARF AARYEVPFGM PSGFPINTLA LMRGVLGTQL RSPERFEALL SALFNGLWAQ
RRNLGDNAVL DETLTQAGFD PQVFHGLTAD GEVKAALKQA TEAAVARGVF GAPTCFVGDA
MFFGQDRLDF VEEALRQGAS SFSS