| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2679 |
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| Symbol | |
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| ID | 5870467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3003955 |
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| End bp | 3004866 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547800 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001668912 |
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| Protein GI | 167033681 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0566483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCA ACCGCTTCGG CGACATCGCC GCCTTCGTCA GCGCCGCGAA GGCTGGCAGC
TTCACCGCCG CCGCTGCCAG CCTGGGCCTG ACCCGTTCAG CGGTGGGCAA GAGCATCGCG
CGCCTGGAAG CACGCATGGC GGTACGCCTG CTCAATCGCA CCACGCGCAA ACTGAGCCTC
ACCGATGAAG GCCTGGTGGC GTTCGAGCGC TGGCGGCAGA TTCTGGATGA CCTGGACGAA
GTTGAAAGCA CCATGGCCCA GCGCCGTGGC AAACCCACCG GCACCCTGCG CCTGACCGCG
CCGCTGTCGC TCGGCCAGCG CCATGTACTG CCGATTCTCG ACCAGTACCT CAAGCAATGG
CCCGAACTGC GTGCGGACAT CCGTTTTACC GACCGTTTCG TCGACCTGGT GGAGGAGGGC
GTGGACGTCG CCGTGCGCAT AGGTGCCCCC AAGGAGGACT CGCAGTTGCT GACTCGCACG
GTGGCCTGGC AGCAGTTCGT GACCTGCGCA TCGCCTGCTT ATCTGGAAAA ACGCGGCGTA
CCTCAAGTGC CCGGTGACCT CTACGGCCAC GACAAGATTG CCTTCCTCGC GGGCGAAAAG
GCCATGCCCT GGCGCTTTCA CACCGAAGCC GGCCTGCACC TGTGCGAAGA CCCCGGGCGG
CTGAACATAG ACAGTTCCGA GGCCATGCTC GACGGCGCCC GGGCCGGTTT CGGGCTGATT
CACCTGCCCA CCTACATCAC CGGCGACGAC CTGCGCGCCG GCACCCTGGT GGAAGTACTG
CATGGCTACC GGCCACCGGC AGACCCGATT CGCATCGTGT ACCCGAGCAA GCGCCACTTG
TCCCCTCGGG TACGCGGCTT CATCGATTTG CTGGTGGCCA GCTGGGAACC GGGCGTGCCC
TGGGAATACT GA
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| Protein sequence | MEPNRFGDIA AFVSAAKAGS FTAAAASLGL TRSAVGKSIA RLEARMAVRL LNRTTRKLSL
TDEGLVAFER WRQILDDLDE VESTMAQRRG KPTGTLRLTA PLSLGQRHVL PILDQYLKQW
PELRADIRFT DRFVDLVEEG VDVAVRIGAP KEDSQLLTRT VAWQQFVTCA SPAYLEKRGV
PQVPGDLYGH DKIAFLAGEK AMPWRFHTEA GLHLCEDPGR LNIDSSEAML DGARAGFGLI
HLPTYITGDD LRAGTLVEVL HGYRPPADPI RIVYPSKRHL SPRVRGFIDL LVASWEPGVP
WEY
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