| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2579 |
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| Symbol | |
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| ID | 5870368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2896489 |
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| End bp | 2897784 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547702 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001668814 |
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| Protein GI | 167033583 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.612583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.495768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCT ACAGCAATAA CTACTACACC GGGACCATGC GCGCTGCCCC CCTGCGCCCG
GCACTGACAG GTGAAAGCCG CGCCGATGTG TGCGTGATCG GTGGCGGCCT GGCAGGCCTT
AGCCTGGCCC GCGAGCTGCT GATGCGCGGG CGCTCGGTGG TGTTGCTGGA GGCGGCACGG
GTGGCCTGGG GCGCCTCCGG GCGCAATGGC GGCTTCGTGC TGCAAGGCTG GTCCGAAGGG
CTGTCGGCGA TCGAGCGGCG CTGCGGCAAG CAGACCGCCG CGGCGCTGTT CCGGCTGTCG
CTGGAGGGGG TCGATATCGT CCGCGACACC ATCGCCCGCC ACCAACTGCC AGGCTGCGCG
GCAACCACCG GCAAACTCAG CGTGGTGCGC TACGACGACG CCGACAACCT GCAGCGCACC
CGCGACCGCA TGGCCCGCGA CTTCAATTTC GACATGGAGT ACCTCGATAC CCAGGCGCTG
CGCAGCCGTC TGAACACCGA TCGCTACTTC CAGGGGCTGC GTGATAGCCA TGGCTTTCAC
TTCCACCCGC TGAACTACTG CCTGGGCCTG GCCGAGTTGG TCGAGCTGGC CGGTGGCCGC
ATACACGAAC AATCGCCAAT GCTGCGGGTG GAACGCAAGG CCGGCCAGCA TCGGGTGGTC
ACCGCCCAGG GGGCGGTCAG CTGCGGCGAT GTGGTGTACT GCTGCGGCGG CTACGGCGGC
CCTGAGTTTG GCCAGTTGCG CCGTGCGTTT CTGCCGATTG CCACGTACGT GGTGCTGACC
GAGCACCTGG GTGAGCGCCT GCGCGATGTA GTACGTACTA CAGACGCAGT GGGCGACAAC
CGCCGCGCCT CGGACTACTA CCGCATCGTC GAGGGTGACC GCCTGCTGTG GGGTGGCCAT
ATCACCACGC GCAACCTGCA GGACGAACAG CGCCTGGGGC AGTTGCTGAC CCGTGACATC
CTTAGCGTGT ACCCACAACT GCAGGGTTTG AAAATCGCCA AGGCCTGGTC TGGGCTGATG
GGTTACGCCC GCCACAAGAT GCCGCACATC GGCCCTCTGG GCCCGGGGTT GTGGGCCTGT
ACTTCATTTG GGGGCCATGG TATGAACACC GCACCCGTGG GTGCACGGGT AATCGCCGAG
GCAGTCTGTA ACGAAAGTGA CCGCTACCGC CTGTTCGACG CCTACGGCCT GGAATGGAAC
GGCGGGCCGT TCGGGCCAGC GGCGGCGCAA ACGGTGTATG CCGGCCTGAA GCTGATGGAC
AAGTTCCAGG AAGCCCGCGC GCAGTACAAC CACTAA
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| Protein sequence | MSSYSNNYYT GTMRAAPLRP ALTGESRADV CVIGGGLAGL SLARELLMRG RSVVLLEAAR
VAWGASGRNG GFVLQGWSEG LSAIERRCGK QTAAALFRLS LEGVDIVRDT IARHQLPGCA
ATTGKLSVVR YDDADNLQRT RDRMARDFNF DMEYLDTQAL RSRLNTDRYF QGLRDSHGFH
FHPLNYCLGL AELVELAGGR IHEQSPMLRV ERKAGQHRVV TAQGAVSCGD VVYCCGGYGG
PEFGQLRRAF LPIATYVVLT EHLGERLRDV VRTTDAVGDN RRASDYYRIV EGDRLLWGGH
ITTRNLQDEQ RLGQLLTRDI LSVYPQLQGL KIAKAWSGLM GYARHKMPHI GPLGPGLWAC
TSFGGHGMNT APVGARVIAE AVCNESDRYR LFDAYGLEWN GGPFGPAAAQ TVYAGLKLMD
KFQEARAQYN H
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