| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2448 |
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| Symbol | |
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| ID | 5870237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2741866 |
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| End bp | 2743842 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547571 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_001668683 |
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| Protein GI | 167033452 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.165811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA AGACTCGCCC TGCTTACTTG GGGGTAATGT TGGGTGTGGC GCTGATTGGC
CTGGGCGTGG CGTATGAAAA GCTCTGGTGC GACCCGCGCG AGCTGTTGCA GGAACCTGCC
GACCCGCAGG CCCTGCACCG GCTCAGCCGG GACGGCGTCA CCGTGGAGTT CGAAGCCCGA
CCGTTGGCCG GCGGGGAGCT GAAGGAAGGC AGCTTCGCCA ACATCCGTTT CAAGCTCAGC
GACCAGAGCA GTGGCCAGCC GCTGTCGGGC ATGGCCCCAG GGGCGTGGAT CGACCCCGCG
CAGTCGGCCC CGTTGGGTGA CCGCGAGCAA AGCTGCAAGG CGCGGGTCGC GCTGTTTCTC
AAGAGCAGCA TCGGGGCCCG GCCGCTGCTC GACCTGAACA GCTACTTCCT GCTGATGCTG
AACAAGGACG CCAGCCTGAC CGTGATCGAC CCGACTGTGT CGGTGGGCGG CGTGACCAGC
ACCATGGCCC GCATCGACCT GCCCGGACGG CCCATGGACT GGGTGGCTAC CAGCGACGAC
AAGCAGGTGT TCGTGTCGAT CCCCGAGCGC GGCAAGGTGG CGGTGATCGA CACCGAAACC
TTCACCCGTG TCGCCGACCT GGACGCCGGC GACCAGCCGC TGCGCGTGGC CTTGCAGCCG
GACCAACACC GGCTGTGGGT TGGCAACAAC AGCAGCGACC CGGCCAAAGG CGGGGTAACC
GTGATCGACG TGCCGGGGCG CAACACCCTG AAAAGCTTCA ATACCGGCAC CGGGCACCAC
GAAATCGCCT TCAGCGCTGA CTCGCGCTAT GCCTACGTCA GCAACCGCGA CAGCGGCACC
CTGAGCGTCA TCGACATCCC GGAAATGCGC CTGGCCAAGA CCATCAAGGT TGGCCCGCAC
CCGCTCTCGG TCAGCTATTC GGCGCTGTCC CAGGCCGTCT ACGTGGTCGA TGGCGAGGAG
GGCAGTGTGC GGGTCTTCGA CGCCCGCAGC CATCAGCTGC GCCACACGGT CAAGGCCGAG
CAGGGCCTGG GGCCGATGCG CTTCAGCAGC GATGGCCGCT ACGGCATCGT GCTCAATACC
CTGGAGAACC AGGCGCTGGT CATAGATGCC AGTACCGACA AGCTGATCCA CCACATCCCG
GTGGCGGCCG AACCGTACCA GCTGACCTTC ACCAAGGGCT ATGCCTACAT ACGTGGCCTG
GCTTCGCCCA AGGTCACCAT GATCAACCTG TCCAGCCTGG GCGAGGGGCG TGCACCGATC
GTGCAAGGTT TCGAGGCCGG CCCGGCAGCG CCGCGCCAGG CAGGTGACCT GCCGCTGGCC
CAGGGGCTGT CGGTGTCACG CGATGACAAC TCGGTGTTCG TGGTCAACCC GGTGGACAAC
ACCACCTACT TCTACGCCGA AGGCATGAAC GCGCCGATGT CCGGCTACAA CAACCGTGGC
CACCAGGCCC GCGCGGCCAT CGTCGTCGAC CGCAGCCTGC GTGAAGTGGC GCCTGGGGTG
TATGGCTCGA CCGTGAAGCT GCCCGCCGCC GGCAAGTTCG ACGTGGCCTT CCTGCTCAAC
CAGCCGCAGA TCATCCATTG CTTCAGCACC GATGTGGCCG CAGCGCCCAA TGCCAGCAAA
CGCAAGGGCG CGCGTGCCGA GTTCATCGGC CTCGACCAGC CTTTGCCGCA GCACAGCGAC
TTTACCGCGC GGGTGCGTAT CGTCGGCGAC GACGGCCAGC CACGCCTGGG CCTGAACGAC
CTGAGCCTGC GCTACTTTCT GGCGCCATCG TCGATGCCGC GCAACCTGCA GCTGCAAGAG
GTGGGCGAGG GTGTGTATCA GGCGGCGCTG AACCTGCCTG AAGCCGGCGC CTGGTACCTG
CATGTGCAGT CGCCCTCGCT GGGGCGCAAG TTTGCCGAAG AGAACTACAC CAGCCTGCGC
GTCCTGCCGG CTGCAGCGAC CAACGCTTCC CAGACTGACG TGAGGAATGT GCGATGA
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| Protein sequence | MNKKTRPAYL GVMLGVALIG LGVAYEKLWC DPRELLQEPA DPQALHRLSR DGVTVEFEAR
PLAGGELKEG SFANIRFKLS DQSSGQPLSG MAPGAWIDPA QSAPLGDREQ SCKARVALFL
KSSIGARPLL DLNSYFLLML NKDASLTVID PTVSVGGVTS TMARIDLPGR PMDWVATSDD
KQVFVSIPER GKVAVIDTET FTRVADLDAG DQPLRVALQP DQHRLWVGNN SSDPAKGGVT
VIDVPGRNTL KSFNTGTGHH EIAFSADSRY AYVSNRDSGT LSVIDIPEMR LAKTIKVGPH
PLSVSYSALS QAVYVVDGEE GSVRVFDARS HQLRHTVKAE QGLGPMRFSS DGRYGIVLNT
LENQALVIDA STDKLIHHIP VAAEPYQLTF TKGYAYIRGL ASPKVTMINL SSLGEGRAPI
VQGFEAGPAA PRQAGDLPLA QGLSVSRDDN SVFVVNPVDN TTYFYAEGMN APMSGYNNRG
HQARAAIVVD RSLREVAPGV YGSTVKLPAA GKFDVAFLLN QPQIIHCFST DVAAAPNASK
RKGARAEFIG LDQPLPQHSD FTARVRIVGD DGQPRLGLND LSLRYFLAPS SMPRNLQLQE
VGEGVYQAAL NLPEAGAWYL HVQSPSLGRK FAEENYTSLR VLPAAATNAS QTDVRNVR
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