| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2426 |
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| Symbol | |
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| ID | 5870215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2713157 |
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| End bp | 2714482 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547549 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001668661 |
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| Protein GI | 167033430 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.154425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGC CTGCCGCTCA ACGCCGTTTG CTAATCGTCG ACCCCTGCGA CGACTGCCAC
CGCTTATTGC CTGGCCTGCG CAACGCAGGC TGGGATGTGG ACAGCTGTAT GCTCGGGGCC
GCGCTGGACC ATCCCTGCGA TGTAGGCCTG CTGCGCTTGC AGGCCACGCA CCTGAGGCAT
CCGGATGCGG TCAAGGACAT GATCAAGCGC AGCAACACCG AATGGATTGC CGTGCTCAGC
GCCGAACAGC TGCGCATGCC GGCGTTCGGT GATTTTGTTT GTGAGTGGTT TTTCGACTTC
CACACCTTGC CGTTCGACGT CTCCCGCGTG CAGGTGACCC TGGGCCGCGC CTTCGGCATG
GCCCGTTTGC GCGGCAAGGG GGCGGTCAAG GTCGATGAGG CGACCCACGA GTTGCTCGGC
GAAAGCCGGC CGATCCGTGA GCTGCGCAAG TTGCTGGGCA AACTGGCGCC CACCGAATCG
CCCGTGCTGA TCCGTGGTGA GAGCGGCACC GGCAAGGAAC TGGTGGCACG CACCCTGCAC
CGTCAGTCGC AACGCAGCGA GCAGCCGTTC ATCGCCATCA ACTGTGGGGC GATCCCCGAG
CATCTGATCC AGTCCGAACT GTTCGGCCAT GAAAAGGGCG CATTCACCGG GGCGCATCAG
CGCAAGGCCG GGCGCATCGA AGCGGCCCAT GGTGGCACGC TGTTTCTCGA TGAAATCGGT
GACCTGCCGC TGGAGTTGCA GGCCAACCTG CTGCGTTTTC TGCAGGAGAA GCACATCGAG
CGGGTGGGCG GCAGCCAGCC GATCCCAGTG GATGTGCGAG TGTTGGCGGC CACCCATGTG
GACCTGGAGC GGGCCATCGA GCAAGGGCGT TTTCGCGAAG ACTTGTATTA CCGCCTGAAC
GTGTTGCAGG TGGTGACCGC GCCGTTGCGC GACCGGCATG GTGACCTGTC CATGCTGGCA
AGCCACTTTG CCCATTTCTA CAGCCTGGAA ACCGGGCGCC GGCCGCGTTC GTTCAGCGAC
CATGCCCTGG CCGCGATGGG CCGGCATGAC TGGCCGGGCA ATGTGCGCGA GCTGGCCAAC
CGTGTGCGCC GGGGGCTGGT GCTGGCTGAA GGGCGGCAGA TCGAGGCGCA GGACTTGGGC
CTGCAGCTGC TCGACCAGGA ACAACAACCG CTGGGCACGC TGGAGGAGTA CAAGCAACGC
GCCGAGCGCC AGGCGCTGTG CGATGTGCTT AACCGGCACA GTGACAACCT GAGTGTGGCG
GCGAAGGTGC TGGGTATCTC GCGGCCGACT TTTTATCGAT TGCTGCACAA GCATCAGATT
CGTTGA
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| Protein sequence | MQQPAAQRRL LIVDPCDDCH RLLPGLRNAG WDVDSCMLGA ALDHPCDVGL LRLQATHLRH
PDAVKDMIKR SNTEWIAVLS AEQLRMPAFG DFVCEWFFDF HTLPFDVSRV QVTLGRAFGM
ARLRGKGAVK VDEATHELLG ESRPIRELRK LLGKLAPTES PVLIRGESGT GKELVARTLH
RQSQRSEQPF IAINCGAIPE HLIQSELFGH EKGAFTGAHQ RKAGRIEAAH GGTLFLDEIG
DLPLELQANL LRFLQEKHIE RVGGSQPIPV DVRVLAATHV DLERAIEQGR FREDLYYRLN
VLQVVTAPLR DRHGDLSMLA SHFAHFYSLE TGRRPRSFSD HALAAMGRHD WPGNVRELAN
RVRRGLVLAE GRQIEAQDLG LQLLDQEQQP LGTLEEYKQR AERQALCDVL NRHSDNLSVA
AKVLGISRPT FYRLLHKHQI R
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