Gene PputGB1_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2382 
Symbol 
ID5870171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2667705 
End bp2668259 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content62% 
IMG OID641547506 
ProductMgtC/SapB transporter 
Protein accessionYP_001668618 
Protein GI167033387 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.186606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.884832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAC GATGTTCAGG CAGGGGCACC ACCGCGATGG ACGTCATCTG GCAAGCAATC 
CAGGCCGAGT TCGCCGATGT CACCGATGAG CGCGAGGTTA CACAAATCCT TGTGCGCCTG
CTGATGGCTG CGGTACTTGG CGCCGTGCTC GGATTCGAGC GTGAACACAA AGGCAAGTCT
GCCGGGGTGC GTACCCATAT GCTGGTCTCG CTGGGTGCCG CCTTGTTCGT GCTGGCACCC
AGTATGGCCG GGGCTGACGA GCAAGCGTTG AGCCGGGTGA TCCAGGGCAT CGTCGCCGGG
ATCGGCTTTC TGGGGGCGGG CACCATCCTC AAGGGTAACG GCCAGGACAC CAGCCATGTG
AAAGGCCTGA CTACTGCTGC CGGGTTGTGG ATGACAGCAG CCATCGGTAC AGCAGCTGGC
ATGGGCCGCG AAGCCACGGC ACTGATCAGC ACGGTACTGG CCCTGTTGGT GCTGGGCACG
ATGCCGTTAC TGGTAGAGAA GGTCGAAGGG CAGGATGAGG AGAAGCAGAA GGAGGAAGAG
GGCAGGAAGC ACTGA
 
Protein sequence
MQARCSGRGT TAMDVIWQAI QAEFADVTDE REVTQILVRL LMAAVLGAVL GFEREHKGKS 
AGVRTHMLVS LGAALFVLAP SMAGADEQAL SRVIQGIVAG IGFLGAGTIL KGNGQDTSHV
KGLTTAAGLW MTAAIGTAAG MGREATALIS TVLALLVLGT MPLLVEKVEG QDEEKQKEEE
GRKH