Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2343 |
Symbol | |
ID | 5870132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2621149 |
End bp | 2621976 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547467 |
Product | amidohydrolase 2 |
Protein accession | YP_001668579 |
Protein GI | 167033348 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCATCT TTGACGAAGC GAAGATCGAT TGCCATAACC ATTTGTTTGA CCCTGCGCGT TTCCCTTACC ACCCCGACGC ACCCTATGCA CCTTCCGGGC AGGAGGTCGC CACCCAGGCG CAGTTCAGTC GGGTGATGGA TGCCTATGGG GTGCAACATG CCTTGCTGGT TGGCCCCAAC AGCGGCTACC ACACCGACAA CCGCTGCCTG CTGCATGCCT TGGCCACCGG GCAGGGGCGC TTCAAGGGCG TGGCGGTGGT CGAAGCGGAT ATCAGCCTCG ATGCGCTGGC GGCCTTGCAG TCGCAAGGTG TAGTGGGTAT CGCCTTCAAC CCCGCGCTGT ACGGGGTAAC CAGCTTGAAG GACGCTGATG GGCTGTTCGG CAAACTCGCC GAGCTTGGCC TGTTTGCGCA GGTGCAGGTA TGTGAGGACC AGTTGCTTGA CCTGCATGGC CTGCTGCAAG GCGCCCATGC ACGCCTGCTG ATCGACCATT GCGGCCGACC GGATGTTGCG GCGGGTGTGC AGCAAGCCGG CTTCCAGGCG CTGCTGCGGT TGGCCGACAG TGGCCGCGCC TGCGTGAAGT TGTCCGGTAT GCAGAAGTTC GCCGCAGCCG ATGCCTTGCT GGAGCAAAGC GGTGCCTACG TCCAGGCCCT GCTCGAAGCC TTTGGCGCCG AAGCCTGTGT GTGGGGTTCG GATTGGCCGT TCATTCGCCA GCGTTCGCGG GTGGACTACG GGCCGCTGCT GAAACTGGCC GAGCGCCTGA TGCCGGATGC CCGGCAGCGC CGTGCGGTGA TGTGGGACAC CCCGCGTCGA TTATTCGGGT TTGCCTAA
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Protein sequence | MTIFDEAKID CHNHLFDPAR FPYHPDAPYA PSGQEVATQA QFSRVMDAYG VQHALLVGPN SGYHTDNRCL LHALATGQGR FKGVAVVEAD ISLDALAALQ SQGVVGIAFN PALYGVTSLK DADGLFGKLA ELGLFAQVQV CEDQLLDLHG LLQGAHARLL IDHCGRPDVA AGVQQAGFQA LLRLADSGRA CVKLSGMQKF AAADALLEQS GAYVQALLEA FGAEACVWGS DWPFIRQRSR VDYGPLLKLA ERLMPDARQR RAVMWDTPRR LFGFA
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