Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2287 |
Symbol | |
ID | 5870076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2548665 |
End bp | 2549144 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641547412 |
Product | 3-demethylubiquinone-9 3-methyltransferase |
Protein accession | YP_001668524 |
Protein GI | 167033293 |
COG category | [S] Function unknown |
COG ID | [COG3865] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.719915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.308943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCCA AGAATACCGT CTGCCTGTGG TATGACCACG ATGCCGAAGA CGCGGCGAAC TTCTATGCCC GAACCTTCCC CGATAGCCAG GTGGTCGCGG TGCACCAGGC ACCCGGCGAT TACCCTTCAG GCAAGCAGGG CGATGTGATT ACCGTGGAGT TCACGGTAAT GGGCATTCCT TGCGTCGGGC TCAACGGTGG TTCGACCTTC AAGCACTGCG AGGCGTTTTC GTTCCAGGTC AGCACCGCGG ACCAAGCCGA GACCGACCGT TTGTGGGATG CCATTGTCGG CAACGGTGGC GAGGCCAGCG TGTGTGGTTG GTGCAAGGAC AAATGGGGGA TTTCGTGGCA GATTACCCCA CGTGTCCTCA TCGAAGCCAT CGGCCACCCC GACCGTGCGG CGGCCAAGCG GGCGTTCGAG GCCATGATGC AGATGGGCAA GATCGATGTG GCCAAGATAG AGGCGGCATT GAAGGGTTGA
|
Protein sequence | MTAKNTVCLW YDHDAEDAAN FYARTFPDSQ VVAVHQAPGD YPSGKQGDVI TVEFTVMGIP CVGLNGGSTF KHCEAFSFQV STADQAETDR LWDAIVGNGG EASVCGWCKD KWGISWQITP RVLIEAIGHP DRAAAKRAFE AMMQMGKIDV AKIEAALKG
|
| |