| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2212 |
|---|
| Symbol | |
|---|
| ID | 5870001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2469901 |
|---|
| End bp | 2470860 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641547337 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001668449 |
|---|
| Protein GI | 167033218 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.990951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAG AACTGTTGAA CGTAGTCGTG CGCAAGCGCG AGATTCAAGG GGCCGACGTG
GTCGTACTCG ACCTTGGGCG AGCCGACGGC GCTGCCTTGC CGGCTTTCGA GGCCGGCGCG
CACGTGGACA TCCATGTGGC GCCCGGCCTG GTGCGCCAGT ACTCGCTGTG CAGCGACCCG
GCGGATGTGA CGGTGTATCG CCTGGGCGTC TTGAAAGACC CGGCGTCCCG TGGTGGTTCG
GTGGGTGTGC ACGAGGCCCT GATGGAGGGG CGCGAGGTAC AGATCAGCGC ACCGCGCAAC
CTGTTCCCGT TGGCGGCTGG CGCCGCCCGT TCGATCCTGC TGGGTGGCGG CATCGGGATC
ACACCCATGA TTGCCATGGC CCACGCCTTG CACCAGCAGG GCGCCGATTT CGAACTGCAT
TACTGTGGGC GCTCGCGTAG CCGCAGTGCG TTTCTCGAAG CGCTGGCCGA TGCGCCATTC
GCGGCACGGG TGGTTACCCA TTTTGACGAT GAAGAGGCGA CGCAGCGCCT GAACCTGGCC
GATGTACTCG GCGCTGGCAT GCCCGGTACG CACCTGTACA CCTGCGGCCC GTCGGGCTTC
ATGGACTGGG TGATCGCAGG AGCGCGCCAG CAGGGCTATG CCGAGGAGCA CATTCACAAG
GAGTACTTCC AGGTCGAGGT CGACGCCACT GGCCAGGGCT TCGAAGTGGT CGCTGCGCGC
AGCAACAAGA CTGTGCAGGT CGCCGAGGGC CAGACCATCC TCGATGCCTT GGCCCAGGTG
GGTATACGCA TCGATATTTC TTGCGAGCAG GGTGTGTGCG GCACCTGCAT GTGCGAGGTA
CTCGAAGGCG AGCCCGACCA TCGCGATGTG TACCTGACCG ATGAAGAGAA GGCCGCGAAC
GACCAGATCC TGGTGTGCTG CTCGCGGGCC AAGTCGAACA AGCTGGTGCT GGATATCTGA
|
|---|
| Protein sequence | MNEELLNVVV RKREIQGADV VVLDLGRADG AALPAFEAGA HVDIHVAPGL VRQYSLCSDP
ADVTVYRLGV LKDPASRGGS VGVHEALMEG REVQISAPRN LFPLAAGAAR SILLGGGIGI
TPMIAMAHAL HQQGADFELH YCGRSRSRSA FLEALADAPF AARVVTHFDD EEATQRLNLA
DVLGAGMPGT HLYTCGPSGF MDWVIAGARQ QGYAEEHIHK EYFQVEVDAT GQGFEVVAAR
SNKTVQVAEG QTILDALAQV GIRIDISCEQ GVCGTCMCEV LEGEPDHRDV YLTDEEKAAN
DQILVCCSRA KSNKLVLDI
|
|---|
| |