Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2174 |
Symbol | |
ID | 5869963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2423979 |
End bp | 2424725 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547299 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001668411 |
Protein GI | 167033180 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.262533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC TGATCACACG CGACCTGGAC CAAGGGCTGC TGACCCTGGC CTTCAACCGC CCCGACAAGC TCAATGCCCT GAACACCGCC ATGTACCAAC AGCTGGGCGA CCTGCTGCTG GCGGCGGGTG AAAACCCTGA TGTCGACGCC ATCATCATCA CCGGTGGGCC GCACTGCTTC AGCGCTGGCA ACGACCTGCG CGACTTCCTC GACAACCCGC CCAGCGACCT GGACAGCCCG GTGTTCCGCC TGATGCGGGT AGTCATGGGG CTGGACAAGC CGCTGATCGC AGCGGTCAGT GGCGCGGCGA TCGGCATCGG GGCCACCCTG TTGCTGCATT GCGACCAGGT GCTGGTCAGC CGCTCGACCA AACTGCGCAT GCCCTTCGCG CCATTGGGTG TGTGCCCGGA GTTCGGCTCC AGCCTGTTGC TGCCGCGTTT GCTTGGCCAG GCCCGTGCGG CGCGCTTGCT GCTGGCCAAC GCGTTGCTCG ATGGCGAACA GATGGTGGCC TGGGGGCTGG CCAATGAACT GCATGAAGAC GGCGCGCAGT GCCTGGCGGC TGCCCGCACC CTGGCGCGGC AGCTGCAAGG CTATCCGCAG GCGGCATTGC GCATCAGCAA GCGGTTGCTC AAGGACAGCC AGCGAGCGGA GCTTGAAGAC ACAGTGGCGC GGGAAAGCCG GTTGTTCATC GAGTGCTTGC GCAGCGAAGA TGCACGAGCT GTGCTGCGCG CACTCATCAA GGATTGA
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Protein sequence | MNDLITRDLD QGLLTLAFNR PDKLNALNTA MYQQLGDLLL AAGENPDVDA IIITGGPHCF SAGNDLRDFL DNPPSDLDSP VFRLMRVVMG LDKPLIAAVS GAAIGIGATL LLHCDQVLVS RSTKLRMPFA PLGVCPEFGS SLLLPRLLGQ ARAARLLLAN ALLDGEQMVA WGLANELHED GAQCLAAART LARQLQGYPQ AALRISKRLL KDSQRAELED TVARESRLFI ECLRSEDARA VLRALIKD
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