Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2121 |
Symbol | |
ID | 5869910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2371942 |
End bp | 2372388 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547246 |
Product | hypothetical protein |
Protein accession | YP_001668358 |
Protein GI | 167033127 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.460411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00638074 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCGGAA TTACGGCAAG CAACCTGATG ATCAACGGCG TTTCAGCGCA GACGCTGAGC GCCAACGCAG CGACTGAACG CGAACAGGCA AAACAGGCCG GTGAGGCACT GGGGCCACTG AGCATCAGCA GTGACAGCAT GAAAGTTTCA GCGGGTAGCC AGGCGCAATC CACCGACACT GAAGACAGTG GCGAGTCGCA GGCCGTGACC GAGCTGCGTC AGCTGATCAA GGATCTGCAG AAACAACTGG CTGAAGAGCA GAAGCAATTG GCTGCGCTGC AGAACAGCAA GATGGACGAG GCCGCCAAGG CGGCTGCGGT GGGCGCCAAG CAGGCGAGCA TTGCCACCAT CAATGGGCAG ATCATGGCAG CCACGGCGCA ATTGCTGGAG CTGTTGCAGC AAGAGGGTGG CAGCAGTGCC GGCGGGATGG TCAGCGCCAC GGCCTGA
|
Protein sequence | MSGITASNLM INGVSAQTLS ANAATEREQA KQAGEALGPL SISSDSMKVS AGSQAQSTDT EDSGESQAVT ELRQLIKDLQ KQLAEEQKQL AALQNSKMDE AAKAAAVGAK QASIATINGQ IMAATAQLLE LLQQEGGSSA GGMVSATA
|
| |