| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2113 |
|---|
| Symbol | |
|---|
| ID | 5869902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2365083 |
|---|
| End bp | 2365982 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641547238 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_001668350 |
|---|
| Protein GI | 167033119 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.236887 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTG AATTCTTTCG CCAAACGGTC CAGGACTGGG CCACTGCCGG CTACCTGCCC
GAGGCGCTGG CCTACGGTTT CGTGGTCAAC GCCCTGCTGG CCGGCCTGAT GATAGGCCCG
GTGCTGGGCG GCCTGGGCAC CCTGGTGGTG GTCAAGCGCT TTGCCTTCTT CTCCGAAGCG
GTCGGCCATG CCGCGCTGAC CGGCGTGGCC ATCGGTATCC TGCTGGGCGA GCCCTACACC
GGCCCTTACG GAAGCCTGTT CGGCTACTGC CTGCTGTTCG GCATCCTGCT CAACTTCCTG
CGCAACCGCA CCGGGCTGTC GCCAGACACG TTGATTGGCG TGTTTCTCTC GGTGTCGCTG
GCGCTGGGCG CCAGCCTGCT GTTGATGCTG GCAGGCAAGA TCAACGTGCA TATCCTCGAA
AACGTGCTGT TCGGCTCGGT GCTGACCGTC AGCGGCCAGG ACCTGGTGGT ACTGGGCATC
GTCGCAGTGC TGGTACTGGC CTTGGCCTTG CCACTCTACA ACCGCATCAT GCTGGCCAGT
TTCAACCCAC AACTGGCAGC GGTGCGTGGG GTGGCGGTGA AAACCCTGGA CTATCTGTTC
GTGGTGCTGG TGACCTTGGT AACCGTGGCC GCAGTGAAAG TGATCGGTGC CATCCTGGTC
GGTGCGCTGT TGGTGATTCC TGCCGCCGCC GCTCGCCTGG TCAGCCAGTC GCTCAAGGGC
TTTTTCTTCC TGTCGGTGCT GATTGCCACC ATCAGCACCC TGTTCGGCAT CCTGTTGCCG
ATCGTGTTCG ACCTGCCGGT GCCGTCAGGT GCCGCGATCA TTCTGGTCGC CGGTCTCTGT
TTCGCCCTGG CCGCCCTGGC CCGCGCCCTC GTTCCCCGCC TGCAAGGAAA CCCGGCATGA
|
|---|
| Protein sequence | MSFEFFRQTV QDWATAGYLP EALAYGFVVN ALLAGLMIGP VLGGLGTLVV VKRFAFFSEA
VGHAALTGVA IGILLGEPYT GPYGSLFGYC LLFGILLNFL RNRTGLSPDT LIGVFLSVSL
ALGASLLLML AGKINVHILE NVLFGSVLTV SGQDLVVLGI VAVLVLALAL PLYNRIMLAS
FNPQLAAVRG VAVKTLDYLF VVLVTLVTVA AVKVIGAILV GALLVIPAAA ARLVSQSLKG
FFFLSVLIAT ISTLFGILLP IVFDLPVPSG AAIILVAGLC FALAALARAL VPRLQGNPA
|
|---|
| |