Gene PputGB1_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2067 
Symbol 
ID5869856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2320833 
End bp2321339 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content62% 
IMG OID641547192 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001668304 
Protein GI167033073 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAGCA CATCGACCCG TAAACTGGGC TTTTTCTTCA GCGACCACCA TCGCTGGTTG 
CTCCAGCATA TCCACAAACG CCTGCGTAAC CACGCCGACG CCGAAGATAC CGCGGCCGAA
ACGTTCTGCC AGATGCTCGG CGCGCGTGTC GATCCAGACA GCATTCAGCA GCCTCGCGCC
TACCTCACCA TCATTGCTCG CCGGCTGATC TTCGACCGCC ACCGTCGTCG CCAGCTCGAG
CACGCCTATC TGGAACATCT GGCGCGGCTG CCGGAGGCCG TAGCGCCATC GGCCGAGGAG
CAGCTGCTGC TGATCGAGGC TCTGGTGACC ATCGATCAGG CACTGGACGG CTTGCCCGCG
GTCGTCAAAG CCACCTTCCT CTATAGCCAG CTCGACGGCA TGCACTACGC CGACATCGCC
GCAAAGCTGC AGATCAGCGA GCGCTCGGTC AGCCGCTACA TGAAACAGGC GCTTCGCCAA
TGTTACCTGT GCGAGGTGCA GGCATGA
 
Protein sequence
MDSTSTRKLG FFFSDHHRWL LQHIHKRLRN HADAEDTAAE TFCQMLGARV DPDSIQQPRA 
YLTIIARRLI FDRHRRRQLE HAYLEHLARL PEAVAPSAEE QLLLIEALVT IDQALDGLPA
VVKATFLYSQ LDGMHYADIA AKLQISERSV SRYMKQALRQ CYLCEVQA