| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2032 |
|---|
| Symbol | |
|---|
| ID | 5869821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2278966 |
|---|
| End bp | 2279874 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641547157 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001668269 |
|---|
| Protein GI | 167033038 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACC GTCTGCTCAA CGACCGCCTC GACTGGAACC TGCTGCGCAC CTTCCGGGTC
ATCGGCCAGG AACTGTCCAT CAGCCGCGCC GCCGCCCGCC TGCACCTCAC CCAGCCGGCC
GTGAGCCAGG CGCTCAAGCG CCTTGAAGAG CAGCTTGGCC GCCAGCTTAT CGCCCGACGT
GGGCCGCGTT TCGTGCTGAC GGAAATGGGC GAGCAGCTGT TCCAGCTGGC TGGCGAGGTG
TATGGGCAGA TGTCGCAGAT CGGCGGTTTG CTGGAGCAAC CGGCGGACGA ACTGGTAGGC
AAGGTGCGTC TGTTGATGAT CAGCCGCATC GTCAGCGAGC GCTTCGACGA CTTCCTCGCC
GACTTCCATC GCCAGCACCC ACGGGTGGAG CTGGAAATCG ACGTGATGCG CAGCTCCGAC
ATCGTCGCAG CCCTGCAGGA GAAAACCGCC ACAGCGGGCC TTAGCCTCAA CCGGCGTGCA
CAACCACGCC TGGAGCAGCG TTTGTTTCTG CGTCAACGCT ATGCGTTTTT CTGCGGCAAA
CACCATGCCT TGTTCGGCCA GGCCGAAGGC GACTTGCAAC GGGAGAATTT CGTCAGTTTT
ACCAGCGACC AGATTGGCGG TATGTTGTCG CCGCTGACCA TTTTCCGCGA CCAGCAGGGC
TTTGCCGGGC GCATCGTGGC GTCATCGCCA AGCCTGGAGG AAGTACGCCG GCTGGTGATC
GCCGGCTTTG GCATCGGCTG CCTGCCCGAG CACGTGGTGG CGCCTGATGT AGAGGCGGGG
TTGCTGTGGA AGTTGCCGCC GCAGGAAGGG ATTGCCGATG TGGATATTCA CCTGCTTTGG
AACAGAGAGC AGCGCTTCAG TCGGGCGGAA GAGGTGTTTA TCGAGGCATT GCAGCAAAGT
CTCGGTTAA
|
|---|
| Protein sequence | MSDRLLNDRL DWNLLRTFRV IGQELSISRA AARLHLTQPA VSQALKRLEE QLGRQLIARR
GPRFVLTEMG EQLFQLAGEV YGQMSQIGGL LEQPADELVG KVRLLMISRI VSERFDDFLA
DFHRQHPRVE LEIDVMRSSD IVAALQEKTA TAGLSLNRRA QPRLEQRLFL RQRYAFFCGK
HHALFGQAEG DLQRENFVSF TSDQIGGMLS PLTIFRDQQG FAGRIVASSP SLEEVRRLVI
AGFGIGCLPE HVVAPDVEAG LLWKLPPQEG IADVDIHLLW NREQRFSRAE EVFIEALQQS
LG
|
|---|
| |