| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1979 |
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| Symbol | |
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| ID | 5869769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2226689 |
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| End bp | 2227765 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547106 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001668218 |
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| Protein GI | 167032987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.744859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0549278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGG CCCTGTGCCA AAGCTTGTGT CTTGCCCTGC CACTGACGGC AAGTGCGCAG
CCGGCTTCGG TGGTGTTCCT CAACCCTGGG CTGTCCACCG AGACGTTCTG GACCAGCTAT
ACCCGCTTCA TGCAGGCCGC CGCGGATGAG CTGGGCATGA CCCTGCGGGT GGAGTACAGC
GAGCGCCGCG CCGACCTGGC GCTGAGCCAG GCCCGGGCGA TTCTGGGTGG GTCGCAGCGG
CCGGACTACC TGGTGCTGGT CAACGAGCAG TACGTGGCAC CGGAAATCCT GCGCCTGTCA
CGTGGCACGG GTGTGAAGCT GCTGCTGGTC AACAATGGCC TGACCGCCAG CCAGGTCCGC
AGCATCGAGG CCCAGCCCGA CAAGTACGCC GAGCCACTGG GGACCTTGAT GAGTAACGAC
GAGCAGGCGG GCTTCCAAAT GCTGCACCAG ATGGTCGCAC AGTTGCCTCG CGACAGCTTT
CCGGTGGACC TGGTGGCCTT TGCCGGGGTC AAGACCACCC CCGCCTCGCA GTTGCGTGAG
GAGGGCATGC GCCGTGCGCT GGCCGACTTC CCCCAGGTGC GCCTGCGTCA GGTGGTGTAC
GGCGGTTGGA ACCGCCAGCG CGCCTATGAA CAGGCCCAGC AGTTGCTGGA GCGCTACCCG
GCCACCCGGC TGGTGTGGTC GGCCAATGAC GAGATGGCCT TTGGTGCCAT GCAGGCGTTC
GAGGAAGCTG GGCACACACC GGGGCGCGAC GTGCTGTTCG GCGCCGTCAA CAGTTCGCCC
GAGGCCTTGC GGGCGCGTAT CGATGGGCGC CTGAGCGTGC TGATGGGTGG GCATTTCACC
CTGGGCGGTT GGGCGATGGT TATGCTGCAC GATGACGCTC AAGGGCTGGC GTTGAACCGC
GACGGGCTGC GCGAGCACAG TGCCCCGGTA TTGCAGGCGA TCGATCAGGC CAAAGCCAAG
CGCTGGCTGA AACTGCTGGA ACGGGACGAT TACGGCGTCG ATTTCCAGCG GTACAGCGCT
GAAGGGCGGC CGCCGGGCTA CCGCTACCCA TTTCTTACGT CACCGGTCGA ATATTGA
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| Protein sequence | MLKALCQSLC LALPLTASAQ PASVVFLNPG LSTETFWTSY TRFMQAAADE LGMTLRVEYS
ERRADLALSQ ARAILGGSQR PDYLVLVNEQ YVAPEILRLS RGTGVKLLLV NNGLTASQVR
SIEAQPDKYA EPLGTLMSND EQAGFQMLHQ MVAQLPRDSF PVDLVAFAGV KTTPASQLRE
EGMRRALADF PQVRLRQVVY GGWNRQRAYE QAQQLLERYP ATRLVWSAND EMAFGAMQAF
EEAGHTPGRD VLFGAVNSSP EALRARIDGR LSVLMGGHFT LGGWAMVMLH DDAQGLALNR
DGLREHSAPV LQAIDQAKAK RWLKLLERDD YGVDFQRYSA EGRPPGYRYP FLTSPVEY
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