Gene PputGB1_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1890 
Symbol 
ID5869675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2127646 
End bp2127984 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content63% 
IMG OID641547012 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001668129 
Protein GI167032898 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.386595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAAGC TGGAGCGACG TGGCGTGATT CGTGGCTATG GGGCAATCAT CGACCAGCAC 
AAAGTGGCGC CCGGGGTGTC ACTGCTGGTG CTGGCGGCCC TGTCCAACCA AAGCGGGCGC
GCGGCACAGA AGGCCTTCGA AGCCACCTTG CACAACTGCC CGGAGGTGCA TGAATGCCAG
CTGATCAGTG GCCACTTCGA CTACAGCCTG CGCCTGCACT GCCGCGACAT GGAACACTAC
CGACTGCTCA GCGAACGCTG GATGAACGAC GACACCTTGC ACATCGACAA GCTGGTGGCG
CACCCCGTGC TGGCCGAGGT CAAGACCATG GCCCGCTAA
 
Protein sequence
MRKLERRGVI RGYGAIIDQH KVAPGVSLLV LAALSNQSGR AAQKAFEATL HNCPEVHECQ 
LISGHFDYSL RLHCRDMEHY RLLSERWMND DTLHIDKLVA HPVLAEVKTM AR