Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1881 |
Symbol | |
ID | 5869666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2118191 |
End bp | 2119069 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641547003 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001668120 |
Protein GI | 167032889 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.407477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTT CCAGCGACAA CATCCAGCTG TTTCTTGCCG TGCTCGACCG CGGTTCCTTT TCCGCCGCTG CGCGCGCGCT CAAACGCGTG CCGTCGGCCG TGAGCATGGC CATCGGCAAC CTTGAGGCGG AACTTGGCTA CAACCTATTC GAACGCGGTC CGCGTGAAGT TCGTCCAACT GCACAAGCTT TGGCCCTGGA GCCACACGCC AGGCTGATTG CCGAGCAATT GGGGCTGCTT CAGGTGCATG CCCTGGAGCT TTCCCAGGGG CTGGAGAGCA GCCTGACGCT GGCGGTGGCA CCCGACATCG ATCACCGCCC GTTGCTGGCG GCCATCGCCA ACCTCGGCGA GCGCCACCCT CTGCTGGACA TCGCCCTGCT GAGCGCCCCG CAGGAGGAAG CCCTGCAGTT GCTGGACAGC GGCCGCGCCG ACCTCTGCGT GGCCTTTGCC GGCCTGCAGG TCGATGCCCG GCGCGGCTTC CAGCACATCG GCATGGAGAC GCTGGTGGCT ACGCTGTCAC CGGCCCACCC GGCCTTGCGT GAGGGGCGTA TCCACTACCT TGAGGACCTG ACCCAAGTGC GTCAGATTCT GGTGCGCAGC CGCGACCTGC CACTGGCTGA CCCTCGCCCG CTGATCGGCG CCACCCACTG GTTCACCGAC AGCTTCGACC TGGCTTTGCA GATGGTGGAA ACCGGCCTGG GCTGGGGCGA CTTGCCGCTG TCGCGGGTCG CGCCGCTGCT GGCCAGCGGG CGCCTGGTAC GCCTGGATTT TCGCAATACC CGCAACGAAT TGCAGTTGCC GGTGCATATC CTGTGGCGCA AACAACAGCC GCTGCAGCAG GCCGCACGGC TGCTGATCGA GCAGTTGGCT GAGCAGTGA
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Protein sequence | MNFSSDNIQL FLAVLDRGSF SAAARALKRV PSAVSMAIGN LEAELGYNLF ERGPREVRPT AQALALEPHA RLIAEQLGLL QVHALELSQG LESSLTLAVA PDIDHRPLLA AIANLGERHP LLDIALLSAP QEEALQLLDS GRADLCVAFA GLQVDARRGF QHIGMETLVA TLSPAHPALR EGRIHYLEDL TQVRQILVRS RDLPLADPRP LIGATHWFTD SFDLALQMVE TGLGWGDLPL SRVAPLLASG RLVRLDFRNT RNELQLPVHI LWRKQQPLQQ AARLLIEQLA EQ
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