Gene PputGB1_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1881 
Symbol 
ID5869666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2118191 
End bp2119069 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content66% 
IMG OID641547003 
ProductLysR family transcriptional regulator 
Protein accessionYP_001668120 
Protein GI167032889 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.407477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTT CCAGCGACAA CATCCAGCTG TTTCTTGCCG TGCTCGACCG CGGTTCCTTT 
TCCGCCGCTG CGCGCGCGCT CAAACGCGTG CCGTCGGCCG TGAGCATGGC CATCGGCAAC
CTTGAGGCGG AACTTGGCTA CAACCTATTC GAACGCGGTC CGCGTGAAGT TCGTCCAACT
GCACAAGCTT TGGCCCTGGA GCCACACGCC AGGCTGATTG CCGAGCAATT GGGGCTGCTT
CAGGTGCATG CCCTGGAGCT TTCCCAGGGG CTGGAGAGCA GCCTGACGCT GGCGGTGGCA
CCCGACATCG ATCACCGCCC GTTGCTGGCG GCCATCGCCA ACCTCGGCGA GCGCCACCCT
CTGCTGGACA TCGCCCTGCT GAGCGCCCCG CAGGAGGAAG CCCTGCAGTT GCTGGACAGC
GGCCGCGCCG ACCTCTGCGT GGCCTTTGCC GGCCTGCAGG TCGATGCCCG GCGCGGCTTC
CAGCACATCG GCATGGAGAC GCTGGTGGCT ACGCTGTCAC CGGCCCACCC GGCCTTGCGT
GAGGGGCGTA TCCACTACCT TGAGGACCTG ACCCAAGTGC GTCAGATTCT GGTGCGCAGC
CGCGACCTGC CACTGGCTGA CCCTCGCCCG CTGATCGGCG CCACCCACTG GTTCACCGAC
AGCTTCGACC TGGCTTTGCA GATGGTGGAA ACCGGCCTGG GCTGGGGCGA CTTGCCGCTG
TCGCGGGTCG CGCCGCTGCT GGCCAGCGGG CGCCTGGTAC GCCTGGATTT TCGCAATACC
CGCAACGAAT TGCAGTTGCC GGTGCATATC CTGTGGCGCA AACAACAGCC GCTGCAGCAG
GCCGCACGGC TGCTGATCGA GCAGTTGGCT GAGCAGTGA
 
Protein sequence
MNFSSDNIQL FLAVLDRGSF SAAARALKRV PSAVSMAIGN LEAELGYNLF ERGPREVRPT 
AQALALEPHA RLIAEQLGLL QVHALELSQG LESSLTLAVA PDIDHRPLLA AIANLGERHP
LLDIALLSAP QEEALQLLDS GRADLCVAFA GLQVDARRGF QHIGMETLVA TLSPAHPALR
EGRIHYLEDL TQVRQILVRS RDLPLADPRP LIGATHWFTD SFDLALQMVE TGLGWGDLPL
SRVAPLLASG RLVRLDFRNT RNELQLPVHI LWRKQQPLQQ AARLLIEQLA EQ