| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1881 |
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| Symbol | |
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| ID | 5869666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2118191 |
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| End bp | 2119069 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547003 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001668120 |
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| Protein GI | 167032889 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.407477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTT CCAGCGACAA CATCCAGCTG TTTCTTGCCG TGCTCGACCG CGGTTCCTTT
TCCGCCGCTG CGCGCGCGCT CAAACGCGTG CCGTCGGCCG TGAGCATGGC CATCGGCAAC
CTTGAGGCGG AACTTGGCTA CAACCTATTC GAACGCGGTC CGCGTGAAGT TCGTCCAACT
GCACAAGCTT TGGCCCTGGA GCCACACGCC AGGCTGATTG CCGAGCAATT GGGGCTGCTT
CAGGTGCATG CCCTGGAGCT TTCCCAGGGG CTGGAGAGCA GCCTGACGCT GGCGGTGGCA
CCCGACATCG ATCACCGCCC GTTGCTGGCG GCCATCGCCA ACCTCGGCGA GCGCCACCCT
CTGCTGGACA TCGCCCTGCT GAGCGCCCCG CAGGAGGAAG CCCTGCAGTT GCTGGACAGC
GGCCGCGCCG ACCTCTGCGT GGCCTTTGCC GGCCTGCAGG TCGATGCCCG GCGCGGCTTC
CAGCACATCG GCATGGAGAC GCTGGTGGCT ACGCTGTCAC CGGCCCACCC GGCCTTGCGT
GAGGGGCGTA TCCACTACCT TGAGGACCTG ACCCAAGTGC GTCAGATTCT GGTGCGCAGC
CGCGACCTGC CACTGGCTGA CCCTCGCCCG CTGATCGGCG CCACCCACTG GTTCACCGAC
AGCTTCGACC TGGCTTTGCA GATGGTGGAA ACCGGCCTGG GCTGGGGCGA CTTGCCGCTG
TCGCGGGTCG CGCCGCTGCT GGCCAGCGGG CGCCTGGTAC GCCTGGATTT TCGCAATACC
CGCAACGAAT TGCAGTTGCC GGTGCATATC CTGTGGCGCA AACAACAGCC GCTGCAGCAG
GCCGCACGGC TGCTGATCGA GCAGTTGGCT GAGCAGTGA
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| Protein sequence | MNFSSDNIQL FLAVLDRGSF SAAARALKRV PSAVSMAIGN LEAELGYNLF ERGPREVRPT
AQALALEPHA RLIAEQLGLL QVHALELSQG LESSLTLAVA PDIDHRPLLA AIANLGERHP
LLDIALLSAP QEEALQLLDS GRADLCVAFA GLQVDARRGF QHIGMETLVA TLSPAHPALR
EGRIHYLEDL TQVRQILVRS RDLPLADPRP LIGATHWFTD SFDLALQMVE TGLGWGDLPL
SRVAPLLASG RLVRLDFRNT RNELQLPVHI LWRKQQPLQQ AARLLIEQLA EQ
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