| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1879 |
|---|
| Symbol | |
|---|
| ID | 5869664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2114936 |
|---|
| End bp | 2116009 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641547001 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001668118 |
|---|
| Protein GI | 167032887 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3949] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGC AGCTGAAGAT TGCCGGCGCA TTTGTCGGCG TGATCGTGGG GGCGGGGTTC
GCTTCGGGGC GGGAACTGTT GTTGTTCTTT GTCGATTTCG GCGTGTGGGG GCTGGTTGGC
GCGTTGGTCA GCGCCGCCTT GTTCACCTTC CTTGGCATGG CCTTGGCCGG CTTGGGCAAC
CGCCAGCAGG CCACTTCGCA CAAGGACGTA ATCCAGGCCA TCTGTGGCCG TCACCTGGGC
CTGTTCGTCG ACTGGCTGAT CACCTTTTTC ATGTTCGCGG TCACCGTGGT CATGCTGGCC
GGCGGTGGTG CGTTGCTGGA GCAGCAGTTC GGTATTCCGG CGCTGACCGG CAGTGTACTG
GTGACGCTGG TGGTGGTTGC CATCGTGTGC CTGGACGTGC GCAAGGTGAT CCTGGCGATT
GGCGCCATTA CCCCGCTGCT GATTCTGGTG GCCTCGGCAA TTGCCTTGTA CGCCGTGTTC
ACCCGTGAAC AGAGCTTCGC GGCGCTCGAC CAGCTGGCCA GCCAGCAACA GGCCGGCACC
CGCCACTGGC TGCTGGGTGC GTTCCTGTAT GTGTCGTACA ACATCGTGGC CGGTGCGCCG
ATCCTGGCCA TTCTGGGCGG TTCGGCCAAG GGCGAGAAAA CTGCAATATG GGGTGGCCTG
CTGGGTGGTG CGGCACTGGG AGGCCTGATG CTGGTGATGA GTGCCGGGCT GTTGTCGCGG
CTGGACAGTG TGGCCGACCT GCCCATGCCG ATGCTGTCGA TTGCCAACGA AGTGTCACCG
CTGCTGGGGC TGGTGATGTG CCTGATCATC TTCGGCATGA TCGTCAACAC TGCAGTGGGC
ACGCTGTTTT CGTTCCTCTC GCGGCTGTTG CCGGCAGGCA CGGCGAAGTT CCGTTGGGGC
TCGGTAGTGA CCGGGGTGGT GGCGTTCGGC TGCAGCCTGG TGGGGTTCAT CAGCCTGGTG
GGCCAGGTGT ACCCGCTTTT CGGTTATTTG GGCTTTGTAC TGATGGCAGC GGTGTTGCTG
GCGTGGGTGC GGCGGGGTAG GGCCGTTAAA GCGGCGCTCA CTGCTGACGC ATGA
|
|---|
| Protein sequence | MQEQLKIAGA FVGVIVGAGF ASGRELLLFF VDFGVWGLVG ALVSAALFTF LGMALAGLGN
RQQATSHKDV IQAICGRHLG LFVDWLITFF MFAVTVVMLA GGGALLEQQF GIPALTGSVL
VTLVVVAIVC LDVRKVILAI GAITPLLILV ASAIALYAVF TREQSFAALD QLASQQQAGT
RHWLLGAFLY VSYNIVAGAP ILAILGGSAK GEKTAIWGGL LGGAALGGLM LVMSAGLLSR
LDSVADLPMP MLSIANEVSP LLGLVMCLII FGMIVNTAVG TLFSFLSRLL PAGTAKFRWG
SVVTGVVAFG CSLVGFISLV GQVYPLFGYL GFVLMAAVLL AWVRRGRAVK AALTADA
|
|---|
| |