| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1717 |
|---|
| Symbol | |
|---|
| ID | 5869497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1941116 |
|---|
| End bp | 1941523 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641546834 |
|---|
| Product | C-5 cytosine-specific DNA methylase |
|---|
| Protein accession | YP_001667956 |
|---|
| Protein GI | 167032725 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0000204575 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGGTT CATGGAGCGC TTACGCTGTT TCCGCCAGCG CCATGCACGA CAACGGGCGC
TGGAGCATCG CAGACCCTCG CCTGCCCGAG GCAAATGACC GGCTCACCTG CGTAATCGAA
TCGCTCGACG GCACCTGGCA CCGCCCCTTC ACAACCCTTG AGCTGGCCGC GCTGCAAAGC
CTGGTCGAAC CAGAGGAACA GTTAGAACTC GACGGCCTGA GCGACCAAGC CTGGCGCGAA
CGAATCGGCA ACGCGGTACC GCCGGCAGCG GCGGAAGCCA TAGCCCATGT AATGGGCACC
ACCCTGCTCC TGGCCGCCCA GGGCGAAACC TTCATGCTCA GCAGCATGCC GATCTGGGTT
CGCCCAGTTG CGGTGGGCCT GAGCGTTTCC CAACTCAGCA ACTCCTGA
|
|---|
| Protein sequence | MWGSWSAYAV SASAMHDNGR WSIADPRLPE ANDRLTCVIE SLDGTWHRPF TTLELAALQS
LVEPEEQLEL DGLSDQAWRE RIGNAVPPAA AEAIAHVMGT TLLLAAQGET FMLSSMPIWV
RPVAVGLSVS QLSNS
|
|---|
| |