| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1710 |
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| Symbol | |
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| ID | 5869490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1935985 |
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| End bp | 1936995 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546827 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001667949 |
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| Protein GI | 167032718 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.262084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000258631 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCAGA AACAAGCAGA AAACCTCGGA ACCTCAGGCG ATTCGGTAGT TAGGAGGTTT
TCTGTCGCAC CGATGATGGA CTGGACAGAC CGCCACTGCC GGTTCTTCCT GCGCCTGCTC
TCCAAGCAAA CCCTGCTCTA CACCGAAATG GTCACCACCG GCGCCCTGTT GCACAACGAC
GCCCAGCGTT TCCTGCGTCA CGATGCCTCC GAGCACCCGC TGGCCCTTCA ACTGGGCGGC
AGTGTGCCGG CCGACCTGGC CGCTTGTGCG CGCCTGGCCG AAGACGCTGG CTACGACGAG
GTCAACCTGA ACGTCGGCTG CCCGAGCGAC CGGGTGCAGA ACAACATGAT CGGCGCCTGC
CTGATGGCTC ACCCGGCGCT GGTGGCCGAC TGCGTGAAAG CCATGCGTGA TGCGGTGTCG
ACCCCGGTGA CGGTGAAGCA CCGCATTGGC ATCAATGGCC GCGACAGCTA CGCCGAGCTG
TGCGACTTCG TCGGCCAGGT GCGCGAGGCC GGCTGCCGGA GCTTCACCGT GCATGCGCGT
ATCGCCATTC TGGAGGGGCT GTCGCCGAAG GAAAACCGCG AAATTCCACC CCTGCGCTAT
GACGTGGCCG CGCAGTTGAA GGCGGACTTC CCGGACCTGG AGATCGTGCT CAACGGCGGG
ATCAAGACCC TGGACGAATG CCAGAAGCAC CTTGAAACCT TCGATGGCGT AATGCTGGGG
CGTGAGGCGT ATCACAACCC TTATCTGCTG GCCGAAGTGG ACCAGCAGCT GTTTGCCAGC
GATGCGCCGG TGGTCAGCCG TAGCGAGGCG TTGGCGCAGT TGCGGCCTTA TATCGTGGCG
CACATGGAAA GCGGTGGCGC GATGCACCAC GTTACCCGGC ATATTCTGGG GCTGGCCCAA
GGGTTCAAAG GCGCGCGGCG TTTCCGCCAA CTACTGTCGG CGGACATCCA CAAGGCGGCA
GAGCCGCTGG CGGTATTTGA TCAGGCGATG GAGTTGTTGC AAGGGCGGTG A
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| Protein sequence | MPQKQAENLG TSGDSVVRRF SVAPMMDWTD RHCRFFLRLL SKQTLLYTEM VTTGALLHND
AQRFLRHDAS EHPLALQLGG SVPADLAACA RLAEDAGYDE VNLNVGCPSD RVQNNMIGAC
LMAHPALVAD CVKAMRDAVS TPVTVKHRIG INGRDSYAEL CDFVGQVREA GCRSFTVHAR
IAILEGLSPK ENREIPPLRY DVAAQLKADF PDLEIVLNGG IKTLDECQKH LETFDGVMLG
REAYHNPYLL AEVDQQLFAS DAPVVSRSEA LAQLRPYIVA HMESGGAMHH VTRHILGLAQ
GFKGARRFRQ LLSADIHKAA EPLAVFDQAM ELLQGR
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