| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1652 |
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| Symbol | |
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| ID | 5869431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1867795 |
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| End bp | 1868679 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546768 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001667891 |
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| Protein GI | 167032660 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.192086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.562298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC CTTTCGACCC CGCCCGCCAG CAAGCCAGCA CGGTGTGCCT GCCACCCGGC
AACTGGGCGA CAGTGCTCGA TTGCTTGTGT GACCATTTCA AGGCCATCGA CCGCGCCCAG
TGGCTTGACC GCTTTGCCCG TGGCCGGGTG CTGAATGCCG AGGGGCAGGC GGTTTCCGCC
GAGCTGCCTT ACAAGCGTGG CATGCGTTTG CACTACTTCC GCGAAGTGCC GAACGAACGG
CCAATCCCGG TGCAGGAGGT GGTACTGCAT GTGGACGAGC ACTTGGTGGT GGCCGACAAA
CCGCATTTCC TACCGGTGAC GCCGACGGGT GAGTATGTCG AGCAGACCTT GCTGCGCCGA
CTGATCCGTC GTCTGGGCAA CCCACATTTG GTGCCGTTGC ACCGCATTGA CCGGCACACC
GCAGGGCTTG TGCTGTTTTC TGCCAACCCG CAAAGCCGCA GCGCCTACCA GCGACTGTTC
CCCGAGCGGC GTATCGACAA GCGCTACCAG GCCATTGCCG CTGCCCTGCC GCAGCATGCA
TTTCCACTTG TGCACAAAAG CCGCCTGGTG CATGGCGAGC CGTTTTTTCG CATGCACGAA
GTTGAGGGCG AGGCCAACAG TGAAACCCTG GCCCAAGTGC TGGAAAAGAA CGGTGAGCTG
TGGCGCTATG GCTTGTCGCC AGTGACAGGC AAGACCCATC AGCTACGCGT GCACATGGCA
GCGTTGGGGG CGGGGATCAG CAACGACCCT TTCTATCCGC AGTTGCGCAA CGAAGAAGAT
GACTATCAGC GACCGCTGAA ACTGTTGGCG CACAGCTTGC GTTTCGAGGA CCCGCTAAGC
GGCGAAGAGC GCTTTTTCGA AAGCCGCTTG CAGTTGGACT GGTAA
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| Protein sequence | MTTPFDPARQ QASTVCLPPG NWATVLDCLC DHFKAIDRAQ WLDRFARGRV LNAEGQAVSA
ELPYKRGMRL HYFREVPNER PIPVQEVVLH VDEHLVVADK PHFLPVTPTG EYVEQTLLRR
LIRRLGNPHL VPLHRIDRHT AGLVLFSANP QSRSAYQRLF PERRIDKRYQ AIAAALPQHA
FPLVHKSRLV HGEPFFRMHE VEGEANSETL AQVLEKNGEL WRYGLSPVTG KTHQLRVHMA
ALGAGISNDP FYPQLRNEED DYQRPLKLLA HSLRFEDPLS GEERFFESRL QLDW
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