Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1584 |
Symbol | |
ID | 5869364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1785374 |
End bp | 1786348 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546702 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001667825 |
Protein GI | 167032594 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.275662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAT TGAACCCGCA CAACACGAAC GGGCCGGGGG CGCCAATGAA CCGCAACGAA CTGCGCAAAG CCGATATCAA CCTGATGGTG GTGTTCGAAG CCCTGATGCA GGAGCGCAAC CTCACCCGTG CCGCGGAAAA GCTGTTCGTC GCCCAACCCA CGGTCAGCGC CGCGCTGGCC AGGTTGCGTG CGATGTTCAA CGACCCGTTG CTGGTCCGTG TGGGTAACCG CATGGAGCCC TCGGCCAGGG CCGAAGAGGT GATCAAGTAC CTCACCCCGG CCCTGGATGC GATGTCCGTC GCCCTCAGCC TGACCCACGA TTTCGACCCC TTGACCAGCA AGATGACCTT CCGCATCGGT TTGTCCGATG ACGTCGAGTC CGGGCTGTTG CCGCCGCTGT TGCGGGCGTT GCGGGTCGAG GCGCCGAATG TGGTGGTGGT CGTGCAGCAT GTGGATTACT GGCGCATCCC CGACTTGCTG GCAGCGGGCG ATGTAACGGT CGGCATCAGC CAGACCAAGG GGCTGCCTGC CAATGCCAAG CGCAAGGTAC TGCGCACGAT GCAGGGCAGG GTAGTGCGCG CCGACAAGTC GGCCACGCCA CTGACACTGG ATGAGTTCTG CGCCCGCCCG CACGTTCAGG TTTCGCCCAC CGCCAACACC CAGGGTGTGG TAGACGATTG GCTTAAAGAG ATTGGCCGCG AACGCAAGGT GGTGTTGTCG GTGCCGCAGT TCAGTTCGCT GCCGGCGATT CTGGCTGGCA CCGACCTGCT GGCCTGTTGC CCGGACTATG CCGCACAGGG CATGGAGCGT TGGGGCAACC TGCAGGCTGA GCAGTTGCCG TTCGAAACCA CGGCGCTGGA GCTGGCGATG GTCTGGTTGA GCACTACCGA CAGCGACCCC GCCGAGCGCT GGCTGCGCAG CCGCCTGGAG CACTACATGG GCGGCGTGCG CTCGTTGGAC GGTGGCCAGG TTTAG
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Protein sequence | MLELNPHNTN GPGAPMNRNE LRKADINLMV VFEALMQERN LTRAAEKLFV AQPTVSAALA RLRAMFNDPL LVRVGNRMEP SARAEEVIKY LTPALDAMSV ALSLTHDFDP LTSKMTFRIG LSDDVESGLL PPLLRALRVE APNVVVVVQH VDYWRIPDLL AAGDVTVGIS QTKGLPANAK RKVLRTMQGR VVRADKSATP LTLDEFCARP HVQVSPTANT QGVVDDWLKE IGRERKVVLS VPQFSSLPAI LAGTDLLACC PDYAAQGMER WGNLQAEQLP FETTALELAM VWLSTTDSDP AERWLRSRLE HYMGGVRSLD GGQV
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