Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1578 |
Symbol | |
ID | 5869358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1778632 |
End bp | 1778880 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546696 |
Product | CsbD family protein |
Protein accession | YP_001667819 |
Protein GI | 167032588 |
COG category | [S] Function unknown |
COG ID | [COG3237] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0515828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.510488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCG AACAGATCGA AGGTGTTGCA GAGAACCTTG CAGGCAAGGC GCAGAGCGCT GTCGGCCGGC TGGTCGAAGA CCCCTCGCTG GAAGCCGAAG GCGATGCGCG TCAGGCTGCA GGCCAGGTGA CCAAGACCTA TGGGGATGCC CTGGACACGG TGTCTTCGTT CGTCAAGGAA AAACCTATCG CCGCGCTGGC AATCACCGCC GCTGTCACAC TGGTGATTTC TCGCCTACTG CGCCGTTGA
|
Protein sequence | MKREQIEGVA ENLAGKAQSA VGRLVEDPSL EAEGDARQAA GQVTKTYGDA LDTVSSFVKE KPIAALAITA AVTLVISRLL RR
|
| |