Gene PputGB1_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1539 
Symbol 
ID5869319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1731425 
End bp1732543 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID641546657 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001667780 
Protein GI167032549 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.524268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAC TCCTGGCAAG CGCCCTGGCG CTGGTGATGA TCGCCGCGCT TTGCGGCTAC 
GGTTTCTGGA CTCAACAGCG CCCGGAAGGC CACTACCTGT CCGACCTGCG CATCGAGTTG
GCACTCAACC ATGGCGTGCC GGGCGAGCAT GGCAACCTGC TCGGTGTGGA GCCGCTGCTT
TACCCAGGCG ACTACCAGAA CCTGCAACGC CTGCACCGCA AGCTCGCCGC TTACCTGGAG
CAAGCCCGAG CCCAAGGGCT GGTGGGCCCA CGCACGGTGG TGGTGCTGCC AGAGCACATC
GGTACCTGGT TGTGGGCGCG CGGTGAGAAA AACGAGCTGT ACCAGGTCAC TCAGAGCCGC
GAGGCTCAAC AATGGCTGGA GCTAAGCAAC CCGCTGCGCT ACGGCCTGGC CATGCTTGGC
GCCGACGGCG ACGACTGGCG TGCCGATGCG CACCTGCGCA TGAAGGCCGA GCAGATGGCC
GCAGACTACC AGCAACTGTT CGGCGGCCTT GCCAAGGAGT TTGGCGTCAC CTTGGTGGCC
GGCTCGATCG TGCTGCCCGA ACCCTACGTG AAACAAGGCG TGCTGCATGC CGGCCGTGGT
CCGCTGTTCA ACAGCAGCGT GGTGTTTGCC GGCGACGGCT CGCTACTGGG CCAGCCCCAA
CGCCAGCAAT ACCCTGACAG TGAAATGCGT CGCTATGTCC ACGACGGCCG CCAGCACCCG
CTGCAAGTCG TGCAGACTCC CGCCGGGCGC CTGGGGGTAC TGGTGGGCAG TGACAGCTGG
TACCCGGAAA ACCACCAACA ACTGGCACAG CAAGCAGTAC AGCTGATCGC CAACCCGGTG
TTCCTGAGCG GCAAAGGCAG CTGGGAAGCG CCATGGCGTG GCAATCGCCA CCAGGAGGCC
ACCGCTGGGC TGGCCCTGCA ACGTGGCGAA GTCAGCGAGC AGAACGCCTG GCAGCGCCTG
ACCGAGGCAG CCGGGGCCGG CGTCAGCAGC ATGAGCGTGT TCATGCGCGG GCAGTTCTGG
GAACAGGCCA GCGACGGCCA GGGCTTTGCC CGCCAGTCGG GTGAACTGCT GGCGGGTACT
CCTAGCCATG GCGCCCGCCT GCTGAACCTG TGGCTGTAG
 
Protein sequence
MRKLLASALA LVMIAALCGY GFWTQQRPEG HYLSDLRIEL ALNHGVPGEH GNLLGVEPLL 
YPGDYQNLQR LHRKLAAYLE QARAQGLVGP RTVVVLPEHI GTWLWARGEK NELYQVTQSR
EAQQWLELSN PLRYGLAMLG ADGDDWRADA HLRMKAEQMA ADYQQLFGGL AKEFGVTLVA
GSIVLPEPYV KQGVLHAGRG PLFNSSVVFA GDGSLLGQPQ RQQYPDSEMR RYVHDGRQHP
LQVVQTPAGR LGVLVGSDSW YPENHQQLAQ QAVQLIANPV FLSGKGSWEA PWRGNRHQEA
TAGLALQRGE VSEQNAWQRL TEAAGAGVSS MSVFMRGQFW EQASDGQGFA RQSGELLAGT
PSHGARLLNL WL