| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1526 |
|---|
| Symbol | |
|---|
| ID | 5869302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1715535 |
|---|
| End bp | 1716539 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641546640 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001667767 |
|---|
| Protein GI | 167032536 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCTA CATTCGATAT CGCCGTCGTC GGCGCCACCG GCAGCGTCGG TGAAACCCTG
GTACAGGTGC TCGAAGAACT GGCGTTCCCG GTCGCCACCC TGCACCTGCT GGCCAGTATG
GAGTCGGCAG GCAGCAGCGT GATGTTCGCC GGCAAGAAGC TGAAGGTGCG CGAGGTCGAC
AGCTTCGATT TCGCCCAGGT AAAACTGGCT TTCTTCGCCA CTGGCGCCGC CGTCAGCCGC
AGCTTTGCCG GCAAGGCGCT GCAGGCGGGC TGCACGGTCA TCGACCTGTC CGGTGAGCTG
GACGGTGGCC TGGCCCTGGT GCCTGAAGCC AACGCGCAAC GCCTGACGGG CCTGGCCCTG
CCGGCGCGTA TTGTCAGCCC GTGCTCGGCG GCGGTTGCCC TGGCGGTCGC GCTGGCGCCG
CTCAAGGGCC TGCTGGACAT CGAGCGGGTA CAGGTGATGG CCGCGCTGGC GGTGTCTGCG
CAAGGCCGTG AAGCGGTCAG CGAACTGGCC CGGCAAACCG CCGAACTGCT CAACGCCCGG
CCGCTGGAGC CGCGCTTCTT CGACCGCCAG GTAGCGTTCA ACCTGCTGGC CCAGGTCGGT
GCTACCGATG AACAGGGCCA TACGGCACTG GAGCGCCGGC TGGTCAGCGA GCTGCGTGTG
CTGCTGGGGC TGCCTGAACT GAAGATTTCC GTAAGCTGTG TTCAAGTCCC GGTGTTTTTC
GGCGATAGCT TCAGTGTGGC CGTGCAGAGC CGTCGCCCGG TTGACCTGGA AGCGGTCAAT
CAGGCCCTGG AGAGCGCCGA AAGTGTTGAG CTGGTGGAGC GTGATGATTA TCCGACCCCG
GTAGGTGACG CAGTGGGCCA AGACGTGGTC TATGTTGGTC GTGTACGTCA CGGTGTTGAT
GAAGACCAGC AGCTCAACCT CTGGCTGACC ACCGACAACG TGCGCAAAGG CGCCGCACTC
AATGCCGTGC AAGTGGCGCA ATTGTTGATT AAACACATGC CGTAA
|
|---|
| Protein sequence | MNPTFDIAVV GATGSVGETL VQVLEELAFP VATLHLLASM ESAGSSVMFA GKKLKVREVD
SFDFAQVKLA FFATGAAVSR SFAGKALQAG CTVIDLSGEL DGGLALVPEA NAQRLTGLAL
PARIVSPCSA AVALAVALAP LKGLLDIERV QVMAALAVSA QGREAVSELA RQTAELLNAR
PLEPRFFDRQ VAFNLLAQVG ATDEQGHTAL ERRLVSELRV LLGLPELKIS VSCVQVPVFF
GDSFSVAVQS RRPVDLEAVN QALESAESVE LVERDDYPTP VGDAVGQDVV YVGRVRHGVD
EDQQLNLWLT TDNVRKGAAL NAVQVAQLLI KHMP
|
|---|
| |