Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1466 |
Symbol | |
ID | 5869235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1649786 |
End bp | 1650262 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641546573 |
Product | fimbrial protein |
Protein accession | YP_001667707 |
Protein GI | 167032476 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.84005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCGA TCATCAACTT CGAAGGTACT GTCAGCGGGC CTGGCACCTG CCCGATCGAA GTCGTTACCC CTGGCGGCCC AAGCCTGCCG CTGATCCACC TGGGCAACTA TAATACGTTC AACTTCACCA AGGTCGGGGA AGAAACCTCT CCGAAACACT TCGCATTGCG CGTCCCGGCA AGCTGCGTGA CCGGTACTCA ACAGGCCTAC GCGACCTACC AGGCAGGCTA CGGCGCCGAC CAGACCAATC CCAACCTCTA TGCCCTCAAA GACGGCCTGG GCTACAGCAC CGGCCTGGGC CTGGCCATCA ACGACCTTGC AACCCGCCTT GCGCCGGGTA CTGAGTCGAT GAGCTACGAG GTTAACGACA CTACCGACAC CGACATGGTG TTCTCGGCGC GCCTTGTCAC CACTTCGGCA ACAGTGACCG AGGGGCAGAT CGACACCAAC GTCTCGTTCT CTGTCGATAT TCGCTAA
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Protein sequence | MASIINFEGT VSGPGTCPIE VVTPGGPSLP LIHLGNYNTF NFTKVGEETS PKHFALRVPA SCVTGTQQAY ATYQAGYGAD QTNPNLYALK DGLGYSTGLG LAINDLATRL APGTESMSYE VNDTTDTDMV FSARLVTTSA TVTEGQIDTN VSFSVDIR
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